The 2.0 version of rSNPBase

Variant report

Variant rs17022889
Chromosome Location chr1:214594998-214594999
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214572600-214612600 Weak transcription Fetal Intestine Small intestine
2 chr1:214575200-214595800 Weak transcription Fetal Kidney kidney
3 chr1:214576800-214612200 Weak transcription Fetal Intestine Large intestine
4 chr1:214581400-214601200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:214584200-214603000 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:214584400-214600000 Weak transcription Fetal Muscle Trunk muscle
7 chr1:214584800-214595800 Weak transcription A549 lung
8 chr1:214590400-214595600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr1:214590800-214595800 Enhancers HMEC breast
10 chr1:214591400-214612800 Weak transcription Pancreas Pancrea
11 chr1:214591600-214595000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:214591600-214596200 Enhancers NHEK skin
13 chr1:214591600-214596400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:214591600-214598400 Weak transcription Adipose Nuclei Adipose
15 chr1:214591600-214600400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr1:214591600-214601200 Weak transcription Gastric stomach
17 chr1:214591600-214601400 Weak transcription Lung lung
18 chr1:214591800-214595000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:214591800-214595000 Weak transcription Esophagus oesophagus
20 chr1:214591800-214595200 Weak transcription Right Ventricle heart
21 chr1:214591800-214595200 Enhancers Osteobl bone
22 chr1:214592000-214600200 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr1:214592000-214602200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:214592200-214595200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:214592200-214595600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:214592400-214595200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:214592400-214595200 Enhancers NHDF-Ad bronchial
28 chr1:214593000-214595000 Weak transcription Aorta Aorta
29 chr1:214593000-214598400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:214593200-214613000 Weak transcription Fetal Muscle Leg muscle
31 chr1:214593400-214595000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:214593400-214595000 Weak transcription HSMM muscle
33 chr1:214593400-214595000 Weak transcription HSMMtube muscle
34 chr1:214593400-214595200 Weak transcription Left Ventricle heart
35 chr1:214593400-214595600 Weak transcription H9 Cell Line embryonic stem cell
36 chr1:214593400-214602400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:214593400-214612800 Weak transcription Ovary ovary
38 chr1:214593600-214596200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr1:214593600-214596400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr1:214593800-214595800 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr1:214593800-214598600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:214594000-214595000 Weak transcription NH-A brain
43 chr1:214594000-214595400 Weak transcription HUVEC blood vessel
44 chr1:214594000-214596000 Weak transcription Fetal Heart heart
45 chr1:214594000-214596400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:214594000-214598400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr1:214594000-214618000 Weak transcription Stomach Smooth Muscle stomach
48 chr1:214594200-214595000 Weak transcription Psoas Muscle Psoas
49 chr1:214594200-214595000 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr1:214594200-214595200 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015