The 2.0 version of rSNPBase

Variant report

Variant rs17022887
Chromosome Location chr1:214594163-214594164
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214572600-214612600 Weak transcription Fetal Intestine Small intestine
2 chr1:214575200-214595800 Weak transcription Fetal Kidney kidney
3 chr1:214576800-214612200 Weak transcription Fetal Intestine Large intestine
4 chr1:214581400-214601200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:214584200-214603000 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:214584400-214600000 Weak transcription Fetal Muscle Trunk muscle
7 chr1:214584800-214595800 Weak transcription A549 lung
8 chr1:214590400-214595600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr1:214590800-214594200 Enhancers Skeletal Muscle Male skeletal muscle
10 chr1:214590800-214594200 Enhancers Skeletal Muscle Female skeletal muscle
11 chr1:214590800-214595800 Enhancers HMEC breast
12 chr1:214591000-214594400 Enhancers Placenta Amnion Placenta Amnion
13 chr1:214591400-214612800 Weak transcription Pancreas Pancrea
14 chr1:214591600-214595000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:214591600-214596200 Enhancers NHEK skin
16 chr1:214591600-214596400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:214591600-214598400 Weak transcription Adipose Nuclei Adipose
18 chr1:214591600-214600400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr1:214591600-214601200 Weak transcription Gastric stomach
20 chr1:214591600-214601400 Weak transcription Lung lung
21 chr1:214591800-214595000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr1:214591800-214595000 Weak transcription Esophagus oesophagus
23 chr1:214591800-214595200 Weak transcription Right Ventricle heart
24 chr1:214591800-214595200 Enhancers Osteobl bone
25 chr1:214592000-214594200 Enhancers HUES64 Cell Line embryonic stem cell
26 chr1:214592000-214594200 Enhancers iPS-20b Cell Line embryonic stem cell
27 chr1:214592000-214594400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:214592000-214600200 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr1:214592000-214602200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:214592200-214594600 Enhancers HUES48 Cell Line embryonic stem cell
31 chr1:214592200-214595200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:214592200-214595600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:214592400-214594400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:214592400-214594600 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr1:214592400-214594600 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:214592400-214595200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:214592400-214595200 Enhancers NHDF-Ad bronchial
38 chr1:214592600-214594200 Enhancers Psoas Muscle Psoas
39 chr1:214592600-214594800 Enhancers ES-I3 Cell Line embryonic stem cell
40 chr1:214593000-214595000 Weak transcription Aorta Aorta
41 chr1:214593000-214598400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr1:214593200-214613000 Weak transcription Fetal Muscle Leg muscle
43 chr1:214593400-214594200 Enhancers HUES6 Cell Line embryonic stem cell
44 chr1:214593400-214594200 Weak transcription NHLF lung
45 chr1:214593400-214594400 Enhancers K562 blood
46 chr1:214593400-214595000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:214593400-214595000 Weak transcription HSMM muscle
48 chr1:214593400-214595000 Weak transcription HSMMtube muscle
49 chr1:214593400-214595200 Weak transcription Left Ventricle heart
50 chr1:214593400-214595600 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015