Variant report
| Variant | rs17033634 |
|---|---|
| Chromosome Location | chr12:103658273-103658274 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr12:103657650..103660193-chr12:103660823..103663749,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000179088 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:13)
| rs_ID | r2[population] |
|---|---|
| rs12578243 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[ASN][1000 genomes] |
| rs12579174 | 1.00[AMR][1000 genomes] |
| rs12579358 | 0.86[ASN][1000 genomes] |
| rs12579725 | 1.00[AMR][1000 genomes];0.91[ASN][1000 genomes] |
| rs12581862 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12582267 | 0.92[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
| rs17033645 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17033698 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes] |
| rs35730312 | 0.89[ASN][1000 genomes] |
| rs57605722 | 1.00[EUR][1000 genomes] |
| rs59258104 | 1.00[AMR][1000 genomes];0.91[ASN][1000 genomes] |
| rs59488535 | 0.83[ASN][1000 genomes] |
| rs60001902 | 0.83[ASN][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
