Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12423213	1.00[AFR][1000 genomes]
rs12423757	1.00[AFR][1000 genomes]
rs12424243	1.00[AFR][1000 genomes]
rs12426345	1.00[AFR][1000 genomes]
rs12578243	0.90[ASN][1000 genomes]
rs12579174	1.00[AFR][1000 genomes]
rs12579358	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12579725	1.00[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12582267	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs12582331	1.00[AFR][1000 genomes]
rs17033634	0.89[ASN][1000 genomes]
rs17033645	1.00[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs17033698	0.97[ASN][1000 genomes]
rs17033712	1.00[AFR][1000 genomes]
rs17033762	1.00[AFR][1000 genomes]
rs4147494	1.00[AFR][1000 genomes]
rs56670740	1.00[AFR][1000 genomes]
rs59258104	1.00[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs59488535	1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs60001902	1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs72487507	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv455703	chr12:103692799-103818049	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv560037	chr12:103692799-103818049	Enhancers Bivalent Enhancer Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103707200-103786400	Weak transcription	Primary B cells from cord blood	blood

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