The 2.0 version of rSNPBase

Variant report

Variant rs17082212
Chromosome Location chr4:53819720-53819721
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53734600-53822400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr4:53786600-53861400 Weak transcription Primary B cells from cord blood blood
3 chr4:53799600-53820200 Weak transcription Fetal Stomach stomach
4 chr4:53800400-53823000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr4:53806200-53822400 Weak transcription NHDF-Ad bronchial
6 chr4:53806400-53820200 Weak transcription Fetal Muscle Trunk muscle
7 chr4:53806600-53820200 Weak transcription Pancreas Pancrea
8 chr4:53808600-53828000 Weak transcription Right Atrium heart
9 chr4:53808800-53836000 Weak transcription Esophagus oesophagus
10 chr4:53810000-53822400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr4:53812000-53820400 Weak transcription Fetal Lung lung
12 chr4:53812400-53828000 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr4:53812400-53831200 Weak transcription Aorta Aorta
14 chr4:53813200-53827000 Weak transcription Spleen Spleen
15 chr4:53813400-53823200 Weak transcription Psoas Muscle Psoas
16 chr4:53813600-53822800 Weak transcription NHLF lung
17 chr4:53813600-53823000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr4:53814200-53829000 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr4:53815000-53820800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr4:53815600-53829800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr4:53816000-53822400 Weak transcription HSMMtube muscle
22 chr4:53816200-53820000 Weak transcription Brain Germinal Matrix brain
23 chr4:53816200-53834200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr4:53816800-53820600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr4:53816800-53822400 Weak transcription Fetal Muscle Leg muscle
26 chr4:53816800-53822800 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr4:53816800-53823200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr4:53817000-53823000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr4:53817000-53823000 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr4:53817200-53822600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr4:53817200-53822800 Weak transcription Placenta Placenta
32 chr4:53817200-53832200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr4:53817600-53823200 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr4:53817600-53826000 Weak transcription Osteobl bone
35 chr4:53817600-53829600 Weak transcription NH-A brain
36 chr4:53817800-53822400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr4:53818000-53820000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr4:53818000-53825600 Weak transcription Muscle Satellite Cultured Cells --
39 chr4:53818200-53849800 Weak transcription Primary T cells from cord blood blood
40 chr4:53818400-53820800 Enhancers Fetal Heart heart
41 chr4:53818600-53820000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr4:53818800-53821400 Enhancers Fetal Intestine Small intestine
43 chr4:53819000-53819800 Enhancers Fetal Intestine Large intestine
44 chr4:53819000-53822400 Weak transcription Thymus Thymus
45 chr4:53819200-53820400 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr4:53819600-53819800 Enhancers Left Ventricle heart
47 chr4:53819600-53821400 Enhancers Ovary ovary
48 chr4:53819600-53822800 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015