The 2.0 version of rSNPBase

Variant report

Variant rs59033992
Chromosome Location chr4:53798458-53798459
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53729200-53807800 Weak transcription Esophagus oesophagus
2 chr4:53734600-53822400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr4:53768800-53815600 Weak transcription Primary hematopoietic stem cells blood
4 chr4:53769000-53804400 Weak transcription Primary B cells from peripheral blood blood
5 chr4:53782200-53799000 Weak transcription NHLF lung
6 chr4:53786600-53861400 Weak transcription Primary B cells from cord blood blood
7 chr4:53786800-53799000 Weak transcription Primary T cells from cord blood blood
8 chr4:53790200-53799400 Weak transcription Left Ventricle heart
9 chr4:53792200-53798600 Weak transcription NH-A brain
10 chr4:53792200-53798800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr4:53792200-53799000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr4:53793000-53798800 Weak transcription Fetal Lung lung
13 chr4:53793000-53799000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr4:53793000-53799000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr4:53793000-53805600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr4:53794000-53798800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr4:53795800-53798800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr4:53796000-53800400 Weak transcription Placenta Placenta
19 chr4:53796400-53809800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr4:53797000-53800200 Enhancers Fetal Thymus thymus
21 chr4:53797200-53798800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr4:53797200-53804000 Weak transcription GM12878-XiMat blood
23 chr4:53797600-53799400 Weak transcription Fetal Intestine Large intestine
24 chr4:53797600-53800800 Enhancers Fetal Muscle Leg muscle
25 chr4:53797600-53808400 Weak transcription Ovary ovary
26 chr4:53797800-53801400 Weak transcription Stomach Mucosa stomach
27 chr4:53798000-53798800 Weak transcription Psoas Muscle Psoas
28 chr4:53798000-53800000 Enhancers Skeletal Muscle Female skeletal muscle
29 chr4:53798000-53800000 Enhancers Thymus Thymus
30 chr4:53798000-53801000 Weak transcription Liver Liver
31 chr4:53798200-53799200 Weak transcription Fetal Muscle Trunk muscle
32 chr4:53798200-53799400 Weak transcription Fetal Stomach stomach
33 chr4:53798200-53800000 Weak transcription Pancreas Pancrea
34 chr4:53798200-53803800 Weak transcription Gastric stomach
35 chr4:53798200-53812200 Weak transcription Fetal Brain Female brain
36 chr4:53798400-53798600 Enhancers HSMMtube muscle
37 chr4:53798400-53799000 Enhancers Osteobl bone
38 chr4:53798400-53799800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr4:53798400-53800800 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015