The 2.0 version of rSNPBase

Variant report

Variant rs73149168
Chromosome Location chr4:53880028-53880029
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53870800-53880200 Weak transcription Esophagus oesophagus
2 chr4:53873200-53880200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr4:53873400-53886800 Weak transcription Left Ventricle heart
4 chr4:53874000-53882200 Enhancers Fetal Kidney kidney
5 chr4:53874600-53885000 Weak transcription Spleen Spleen
6 chr4:53875600-53881400 Weak transcription HepG2 liver
7 chr4:53875800-53882200 Enhancers Fetal Adrenal Gland Adrenal Gland
8 chr4:53876000-53885800 Weak transcription Small Intestine intestine
9 chr4:53876200-53883000 Weak transcription Fetal Muscle Trunk muscle
10 chr4:53876400-53882600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr4:53876600-53880800 Enhancers Adipose Nuclei Adipose
12 chr4:53876800-53884600 Weak transcription Liver Liver
13 chr4:53877400-53880600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr4:53877600-53880400 Enhancers Primary T helper cells fromperipheralblood blood
15 chr4:53877600-53881600 Enhancers Fetal Muscle Leg muscle
16 chr4:53877600-53881800 Enhancers Fetal Intestine Large intestine
17 chr4:53877800-53880200 Enhancers Fetal Stomach stomach
18 chr4:53877800-53880400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr4:53877800-53880600 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr4:53878200-53881800 Enhancers Fetal Intestine Small intestine
21 chr4:53878400-53880200 Weak transcription Rectal Smooth Muscle rectum
22 chr4:53878400-53880400 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr4:53878400-53882800 Enhancers NHLF lung
24 chr4:53878400-53888000 Weak transcription Right Atrium heart
25 chr4:53878600-53880400 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr4:53878800-53880400 Enhancers Primary T helper naive cells fromperipheralblood blood
27 chr4:53878800-53886200 Weak transcription Psoas Muscle Psoas
28 chr4:53879200-53880400 Enhancers Primary T helper cells PMA-I stimulated --
29 chr4:53879200-53883000 Enhancers Osteobl bone
30 chr4:53879200-53885000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr4:53879200-53885800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr4:53879400-53880200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr4:53879400-53880200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr4:53879400-53880400 Weak transcription Muscle Satellite Cultured Cells --
35 chr4:53879400-53880600 Enhancers Dnd41 blood
36 chr4:53879400-53880800 Enhancers Primary T cells from cord blood blood
37 chr4:53879400-53881000 Enhancers Primary hematopoietic stem cells blood
38 chr4:53879400-53881400 Weak transcription HSMM muscle
39 chr4:53879400-53881800 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr4:53879400-53882200 Weak transcription HSMMtube muscle
41 chr4:53879400-53882400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr4:53879400-53882400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr4:53879400-53882600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
44 chr4:53879400-53882600 Enhancers NHDF-Ad bronchial
45 chr4:53879400-53882800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr4:53879400-53885600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr4:53879400-53887800 Weak transcription Fetal Heart heart
48 chr4:53879400-53888400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr4:53879400-53889600 Weak transcription Aorta Aorta
50 chr4:53879600-53880200 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015