Variant report

Variant	rs17100383
Chromosome Location	chr14:63259458-63259459
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10483755	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11846818	0.86[ASW][hapmap];0.89[LWK][hapmap];0.86[AFR][1000 genomes]
rs11847525	0.91[ASN][1000 genomes]
rs11850520	0.82[YRI][hapmap];0.84[AFR][1000 genomes]
rs11850687	0.97[AFR][1000 genomes]
rs1387756	0.85[JPT][hapmap]
rs1490029	0.82[AFR][1000 genomes]
rs1490030	0.82[YRI][hapmap];0.84[AFR][1000 genomes]
rs17100280	0.85[JPT][hapmap]
rs17100353	1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap]
rs17100391	1.00[CHB][hapmap];0.85[JPT][hapmap];0.88[YRI][hapmap]
rs2101552	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs2101553	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs2130445	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs2171878	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs4899094	0.84[CHD][hapmap];0.85[JPT][hapmap]
rs4902182	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs7141868	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7149270	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs7150550	0.87[ASW][hapmap];1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7154700	0.82[CHB][hapmap];0.84[CHD][hapmap];0.85[JPT][hapmap]
rs7157416	1.00[CHB][hapmap];0.89[CHD][hapmap];1.00[JPT][hapmap]
rs7157560	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs8003765	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs8007544	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8008313	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8009892	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs8010787	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs8010814	0.84[CHD][hapmap];0.85[JPT][hapmap]
rs8022090	0.80[LWK][hapmap]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63255600-63274400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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