Variant report

Variant	rs17100353
Chromosome Location	chr14:63235819-63235820
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10137751	0.91[ASN][1000 genomes]
rs10144027	0.82[ASN][1000 genomes]
rs10146714	0.82[ASN][1000 genomes]
rs10483755	1.00[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1387756	0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs17100280	0.85[JPT][hapmap]
rs17100383	1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap]
rs17100391	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs2101552	0.82[CHB][hapmap];0.85[JPT][hapmap];0.84[ASN][1000 genomes]
rs2101553	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs2130445	0.82[CHB][hapmap];0.85[JPT][hapmap];0.84[ASN][1000 genomes]
rs2171878	0.82[CHB][hapmap];0.85[JPT][hapmap];0.84[ASN][1000 genomes]
rs4899094	0.83[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.81[ASN][1000 genomes]
rs4902182	0.82[CHB][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs61472478	0.82[ASN][1000 genomes]
rs7141353	1.00[GIH][hapmap]
rs7141855	0.82[ASN][1000 genomes]
rs7141868	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs7149270	1.00[JPT][hapmap]
rs7150550	0.82[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap]
rs7154700	0.82[CHB][hapmap];0.83[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.84[ASN][1000 genomes]
rs7157416	1.00[CHB][hapmap];0.89[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs7157560	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs73271163	0.95[ASN][1000 genomes]
rs73271176	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs73271181	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs73271182	0.82[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs73271187	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73271188	0.82[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs73271190	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs73271194	0.91[ASN][1000 genomes]
rs74058950	0.82[ASN][1000 genomes]
rs8003765	0.82[ASW][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs8007544	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs8008313	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs8009892	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs8010787	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs8010814	0.83[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.85[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63227200-63246400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:63233200-63248800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr14:63235400-63236200	Enhancers	Brain Germinal Matrix	brain
4	chr14:63235600-63236000	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr14:63235600-63236200	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr14:63235800-63236200	Enhancers	Psoas Muscle	Psoas
7	chr14:63235800-63236400	Enhancers	Skeletal Muscle Female	skeletal muscle

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