Variant report

Variant	rs8003765
Chromosome Location	chr14:63236339-63236340
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10137751	0.89[ASN][1000 genomes]
rs10144027	0.80[ASN][1000 genomes]
rs10146714	0.80[ASN][1000 genomes]
rs10483755	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs11847525	0.80[ASN][1000 genomes]
rs1387756	0.85[JPT][hapmap];0.80[ASN][1000 genomes]
rs17100280	0.85[JPT][hapmap]
rs17100353	0.82[ASW][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs17100383	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs17100391	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs2101552	0.82[CHB][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs2101553	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs2130445	0.82[CHB][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs2171878	0.82[CHB][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs4899094	0.84[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap]
rs4902182	0.82[CHB][hapmap];0.85[JPT][hapmap];0.80[ASN][1000 genomes]
rs61472478	0.80[ASN][1000 genomes]
rs7141353	1.00[GIH][hapmap]
rs7141855	0.80[ASN][1000 genomes]
rs7141868	1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs7149270	1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs7150550	0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs7154700	0.82[CHB][hapmap];0.84[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs7157416	1.00[CHB][hapmap];0.89[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs7157560	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs73271163	0.93[ASN][1000 genomes]
rs73271176	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs73271181	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73271182	0.82[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs73271187	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs73271188	0.82[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs73271190	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73271194	0.93[ASN][1000 genomes]
rs74058950	0.80[ASN][1000 genomes]
rs8007544	0.82[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs8008313	0.82[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs8009892	0.82[CHB][hapmap];0.85[JPT][hapmap]
rs8010787	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs8010814	0.84[CHD][hapmap];1.00[GIH][hapmap];0.85[JPT][hapmap];0.83[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63227200-63246400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:63233200-63248800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr14:63235800-63236400	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr14:63236000-63236600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr14:63236200-63237400	Weak transcription	Brain Germinal Matrix	brain

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