Variant report

Variant	rs10146714
Chromosome Location	chr14:63204164-63204165
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10131119	0.99[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10137751	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs10144027	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10149875	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs10483755	0.91[ASN][1000 genomes]
rs1387756	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17100353	0.82[ASN][1000 genomes]
rs2101552	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2130445	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2171878	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28491761	0.81[AMR][1000 genomes]
rs28754390	0.93[AFR][1000 genomes]
rs4899094	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4902178	0.87[AFR][1000 genomes]
rs4902182	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61472478	1.00[ASN][1000 genomes]
rs6573459	0.82[AFR][1000 genomes]
rs7141855	0.82[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7141868	0.82[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7154700	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7157416	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7157560	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7158523	0.87[AFR][1000 genomes]
rs73271163	0.87[ASN][1000 genomes]
rs73271176	0.87[ASN][1000 genomes]
rs73271181	0.85[ASN][1000 genomes]
rs73271182	0.89[ASN][1000 genomes]
rs73271187	0.87[ASN][1000 genomes]
rs73271188	0.87[ASN][1000 genomes]
rs73271190	0.85[ASN][1000 genomes]
rs73271194	0.87[ASN][1000 genomes]
rs74058950	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8003224	0.83[AFR][1000 genomes]
rs8003765	0.80[ASN][1000 genomes]
rs8010787	0.85[ASN][1000 genomes]
rs8010814	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527675	chr14:63168547-63211280	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63201800-63206200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr14:63202800-63212000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:63203200-63204200	Weak transcription	A549	lung
4	chr14:63203800-63205200	Enhancers	Hela-S3	cervix

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