The 2.0 version of rSNPBase

Variant report

Variant rs17109160
Chromosome Location chr14:39839579-39839580
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:39757400-39843800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr14:39770800-39872400 Weak transcription Colonic Mucosa Colon
3 chr14:39792800-39841600 Weak transcription Muscle Satellite Cultured Cells --
4 chr14:39794400-39843200 Weak transcription HUVEC blood vessel
5 chr14:39802000-39841200 Weak transcription Rectal Smooth Muscle rectum
6 chr14:39803000-39845800 Weak transcription NHEK skin
7 chr14:39803200-39843400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr14:39803200-39845800 Weak transcription Brain Cingulate Gyrus brain
9 chr14:39803400-39843800 Weak transcription HMEC breast
10 chr14:39808400-39841200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr14:39812200-39845800 Weak transcription Stomach Mucosa stomach
12 chr14:39816800-39843200 Weak transcription Hela-S3 cervix
13 chr14:39816800-39850200 Weak transcription Fetal Kidney kidney
14 chr14:39817400-39843800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr14:39818800-39845200 Weak transcription Placenta Placenta
16 chr14:39818800-39867200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr14:39826000-39843200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr14:39833800-39839600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr14:39833800-39841400 Weak transcription Osteobl bone
20 chr14:39834000-39851600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr14:39834400-39839800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr14:39834600-39846000 Weak transcription Primary hematopoietic stem cells blood
23 chr14:39834600-39851600 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr14:39834800-39840800 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr14:39834800-39846000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr14:39835000-39841000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr14:39835000-39851600 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr14:39835200-39851600 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr14:39835400-39840600 Strong transcription Fetal Intestine Large intestine
30 chr14:39835400-39851400 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr14:39835400-39872400 Weak transcription Fetal Muscle Leg muscle
32 chr14:39836000-39839600 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr14:39836000-39845600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr14:39836200-39872800 Weak transcription Esophagus oesophagus
35 chr14:39836400-39839600 Weak transcription Pancreas Pancrea
36 chr14:39836400-39839800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr14:39836400-39870600 Weak transcription Gastric stomach
38 chr14:39836600-39839600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr14:39836600-39843400 Weak transcription NH-A brain
40 chr14:39836600-39845800 Weak transcription Right Atrium heart
41 chr14:39836600-39852600 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr14:39836800-39839600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr14:39836800-39845800 Weak transcription Brain Anterior Caudate brain
44 chr14:39836800-39845800 Weak transcription Right Ventricle heart
45 chr14:39837000-39852600 Weak transcription Primary T cells from cord blood blood
46 chr14:39837400-39839600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr14:39837600-39839600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr14:39837600-39839600 Weak transcription Brain Substantia Nigra brain
49 chr14:39837600-39845800 Weak transcription Brain Angular Gyrus brain
50 chr14:39837600-39845800 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015