Variant report
| Variant | rs17111260 |
|---|---|
| Chromosome Location | chr10:97743136-97743137 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:10)
| rs_ID | r2[population] |
|---|---|
| rs10509702 | 1.00[GIH][hapmap] |
| rs10509705 | 1.00[GIH][hapmap] |
| rs12775598 | 1.00[AFR][1000 genomes] |
| rs1556745 | 1.00[GIH][hapmap] |
| rs17385450 | 1.00[GIH][hapmap] |
| rs17476713 | 1.00[GIH][hapmap] |
| rs35360884 | 1.00[AFR][1000 genomes] |
| rs41308659 | 0.85[AMR][1000 genomes];0.98[EUR][1000 genomes] |
| rs4917721 | 1.00[GIH][hapmap] |
| rs71482380 | 1.00[AFR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv2761619 | chr10:97719520-97746180 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
