Variant report

Variant	rs17158144
Chromosome Location	chr7:103650219-103650220
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:103648042..103650999-chr7:103656412..103659096,2	K562	blood:
2	chr7:103649604..103651650-chr7:103686629..103688588,2	K562	blood:
3	chr7:103649399..103652375-chr7:103652385..103654940,3	K562	blood:
4	chr7:103564555..103566285-chr7:103650093..103652730,2	K562	blood:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10216187	0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10216198	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10224925	1.00[ASN][1000 genomes]
rs10230068	1.00[ASN][1000 genomes]
rs10273035	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10487182	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11971265	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.97[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11972170	0.83[EUR][1000 genomes]
rs12056044	0.88[ASN][1000 genomes]
rs17158113	1.00[ASN][1000 genomes]
rs17158137	1.00[ASN][1000 genomes]
rs17158288	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55825925	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56272143	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56334899	0.83[EUR][1000 genomes]
rs60375583	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6465955	1.00[ASN][1000 genomes]
rs6465957	1.00[ASN][1000 genomes]
rs71154387	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73405684	0.83[EUR][1000 genomes]
rs73405688	0.83[EUR][1000 genomes]
rs73405690	0.83[EUR][1000 genomes]
rs73405692	0.83[EUR][1000 genomes]
rs73409925	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73409927	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888924	chr7:103637906-103706936	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103646000-103650400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr7:103650000-103651200	Enhancers	Liver	Liver
3	chr7:103650200-103650600	Flanking Active TSS	HepG2	liver

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