Variant report

Variant	rs17232045
Chromosome Location	chr10:97960069-97960070
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97803734..97806722-chr10:97959272..97960926,2	K562	blood:

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10491068	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10509698	0.87[CEU][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs10509702	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap]
rs10509705	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap]
rs1414916	1.00[CEU][hapmap]
rs1556745	0.87[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs17383897	0.87[CEU][hapmap]
rs17385450	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap]
rs17468599	0.87[CEU][hapmap];1.00[TSI][hapmap]
rs17476608	1.00[CEU][hapmap]
rs17476713	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap]
rs1870173	0.85[EUR][1000 genomes]
rs3088372	1.00[CEU][hapmap]
rs4917721	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap]
rs4918987	1.00[CEU][hapmap]
rs61856982	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97947400-97961800	Weak transcription	Pancreas	Pancrea
2	chr10:97948000-97963800	Weak transcription	Placenta	Placenta
3	chr10:97948200-97963600	Weak transcription	Gastric	stomach
4	chr10:97948200-97979000	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr10:97948400-97974200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr10:97948600-97962800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr10:97948600-97969400	Weak transcription	Fetal Stomach	stomach
8	chr10:97949600-97989200	Strong transcription	Liver	Liver
9	chr10:97950000-97969400	Weak transcription	Esophagus	oesophagus
10	chr10:97950600-97960600	Weak transcription	Small Intestine	intestine
11	chr10:97952000-98010200	Weak transcription	Fetal Kidney	kidney
12	chr10:97952200-97971800	Strong transcription	Primary B cells from cord blood	blood
13	chr10:97953600-97967000	Weak transcription	Colonic Mucosa	Colon
14	chr10:97953600-97967800	Strong transcription	GM12878-XiMat	blood
15	chr10:97954600-97964200	Weak transcription	Adipose Nuclei	Adipose
16	chr10:97955400-97971800	Strong transcription	Primary B cells from peripheral blood	blood
17	chr10:97957000-97964400	Weak transcription	Placenta Amnion	Placenta Amnion
18	chr10:97957600-97988400	Weak transcription	Duodenum Smooth Muscle	Duodenum
19	chr10:97958800-97971400	Strong transcription	Duodenum Mucosa	Duodenum
20	chr10:97958800-97976400	Strong transcription	Fetal Intestine Large	intestine
21	chr10:97959000-97988800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
22	chr10:97959400-97960600	Weak transcription	Rectal Mucosa Donor 31	rectum
23	chr10:97959600-97961800	Weak transcription	Spleen	Spleen
24	chr10:97959800-97968000	Strong transcription	Rectal Mucosa Donor 29	rectum
25	chr10:97960000-97961600	Weak transcription	Fetal Intestine Small	intestine

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