The 2.0 version of rSNPBase

Variant report

Variant rs17246385
Chromosome Location chr14:66133043-66133044
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:66081400-66142200 Weak transcription Thymus Thymus
2 chr14:66090800-66145000 Weak transcription Small Intestine intestine
3 chr14:66092800-66141000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr14:66099000-66135200 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr14:66099200-66135800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr14:66099200-66144000 Weak transcription Duodenum Mucosa Duodenum
7 chr14:66100600-66160000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr14:66105000-66143400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr14:66105000-66149600 Weak transcription Fetal Thymus thymus
10 chr14:66105000-66157400 Weak transcription Primary hematopoietic stem cells blood
11 chr14:66105200-66135600 Weak transcription Primary T cells fromperipheralblood blood
12 chr14:66105200-66136000 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr14:66113400-66141400 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr14:66114000-66135600 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr14:66116200-66135000 Weak transcription Dnd41 blood
16 chr14:66120200-66135000 Weak transcription Primary B cells from cord blood blood
17 chr14:66123200-66133800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr14:66125600-66135800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr14:66125600-66138200 Weak transcription NHLF lung
20 chr14:66125600-66146600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr14:66125600-66157400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr14:66126400-66146800 Weak transcription Brain Cingulate Gyrus brain
23 chr14:66126800-66135400 Weak transcription GM12878-XiMat blood
24 chr14:66126800-66153400 Weak transcription Aorta Aorta
25 chr14:66128200-66138600 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr14:66129400-66143200 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr14:66130400-66133200 Enhancers HUES48 Cell Line embryonic stem cell
28 chr14:66130400-66133200 Enhancers HUES64 Cell Line embryonic stem cell
29 chr14:66130400-66141800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr14:66130400-66146600 Weak transcription Brain Angular Gyrus brain
31 chr14:66130800-66136000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr14:66130800-66141600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr14:66131000-66143400 Weak transcription Rectal Smooth Muscle rectum
34 chr14:66131400-66141200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr14:66131600-66133200 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr14:66131600-66133200 Enhancers iPS-20b Cell Line embryonic stem cell
37 chr14:66131600-66135600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr14:66131800-66137000 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr14:66131800-66138400 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr14:66132000-66136200 Weak transcription Placenta Placenta
41 chr14:66132000-66138400 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr14:66132200-66133400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr14:66132400-66139600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr14:66132800-66134800 Weak transcription Primary B cells from peripheral blood blood
45 chr14:66133000-66140000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015