Variant report

Variant	rs17267151
Chromosome Location	chr13:92800945-92800946
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10492504	1.00[CHB][hapmap]
rs1172297	1.00[CHB][hapmap]
rs1177726	1.00[CHB][hapmap]
rs1330978	1.00[CHB][hapmap]
rs1330982	1.00[CHB][hapmap]
rs1330983	1.00[CHB][hapmap]
rs1330984	1.00[CHB][hapmap]
rs1330995	1.00[CHB][hapmap]
rs1411747	0.85[CEU][hapmap];1.00[CHB][hapmap]
rs16947132	1.00[CHB][hapmap]
rs16947150	1.00[CHB][hapmap]
rs16947290	1.00[ASW][hapmap]
rs17426071	1.00[CHB][hapmap]
rs2148521	1.00[CHB][hapmap]
rs2182533	1.00[CHB][hapmap]
rs2209651	1.00[CHB][hapmap]
rs4408406	1.00[CHB][hapmap]
rs4771854	1.00[CHB][hapmap]
rs6650316	1.00[CHB][hapmap]
rs7334533	1.00[CHB][hapmap]
rs7336644	1.00[CHB][hapmap]
rs7489550	1.00[CHB][hapmap]
rs7987741	1.00[CHB][hapmap]
rs7991537	1.00[CHB][hapmap]
rs880546	1.00[CHB][hapmap]
rs9301781	1.00[CHB][hapmap]
rs9301782	1.00[CHB][hapmap]
rs9523526	1.00[CHB][hapmap]
rs9523535	1.00[CHB][hapmap]
rs9556163	1.00[CHB][hapmap]
rs9560982	1.00[CHB][hapmap]
rs9560983	1.00[CHB][hapmap]
rs9560984	1.00[CHB][hapmap]
rs9560986	1.00[CHB][hapmap]
rs9560988	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3378326	chr13:92445514-92816367	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv2756005	chr13:92584199-93080799	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv900890	chr13:92651148-92808689	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv456066	chr13:92694581-92884370	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv562723	chr13:92694581-92884370	Flanking Active TSS Active TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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