Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:92951893..92954281-chr13:92957574..92960507,2	K562	blood:
2	chr13:92010436..92012496-chr13:92953050..92954701,2	K562	blood:

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs11616708	0.87[CHB][hapmap];0.81[ASN][1000 genomes]
rs11616739	0.93[CHB][hapmap];0.86[CHD][hapmap];0.85[JPT][hapmap]
rs13378344	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13378505	0.81[JPT][hapmap]
rs16947237	0.91[CEU][hapmap]
rs17267151	1.00[ASW][hapmap]
rs1887155	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs1887156	0.86[CHB][hapmap]
rs1926624	0.86[CHB][hapmap]
rs1926628	0.93[CHB][hapmap];0.85[JPT][hapmap]
rs1926632	0.81[JPT][hapmap]
rs1926640	0.81[JPT][hapmap]
rs1926655	0.81[JPT][hapmap]
rs28800355	0.80[ASN][1000 genomes]
rs4085672	1.00[CHB][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs4601908	0.81[JPT][hapmap]
rs4771856	0.81[JPT][hapmap]
rs6492598	0.86[CHB][hapmap]
rs6492603	0.81[JPT][hapmap]
rs7327328	0.93[CHB][hapmap];0.89[CHD][hapmap];0.85[JPT][hapmap]
rs7994032	0.86[CHB][hapmap]
rs8001201	0.93[CHB][hapmap];0.80[JPT][hapmap]
rs9284270	0.86[CHB][hapmap]
rs9284271	0.86[CHB][hapmap]
rs9301794	0.81[JPT][hapmap]
rs943286	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9584017	0.81[JPT][hapmap]
rs9584018	0.81[JPT][hapmap]
rs9584020	0.94[ASN][1000 genomes]
rs9584022	0.81[JPT][hapmap]
rs9584024	0.81[JPT][hapmap]
rs9589492	0.93[CHB][hapmap]
rs9589493	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9589494	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9589496	0.93[CHB][hapmap];1.00[JPT][hapmap]
rs9589502	0.81[JPT][hapmap]
rs9589504	0.81[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756005	chr13:92584199-93080799	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv456067	chr13:92868073-92967664	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv562726	chr13:92868073-92967664	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv2753357	chr13:92903199-93026399	Enhancers ZNF genes & repeats Weak transcription Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv518324	chr13:92917856-92955354	Active TSS Enhancers ZNF genes & repeats Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv1036835	chr13:92953101-93039812	Enhancers ZNF genes & repeats Weak transcription Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv1050788	chr13:92953101-93045491	Enhancers Active TSS Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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