Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11709210	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11920171	0.81[EUR][1000 genomes]
rs11920736	1.00[JPT][hapmap]
rs11921385	1.00[JPT][hapmap]
rs11923133	0.81[EUR][1000 genomes]
rs11923954	1.00[JPT][hapmap]
rs11924816	0.81[EUR][1000 genomes]
rs11926475	1.00[JPT][hapmap]
rs11927377	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs17016855	1.00[ASN][1000 genomes]
rs17016897	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs17016903	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs17016904	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs17336055	0.82[ASW][hapmap];0.91[LWK][hapmap];0.88[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs4362686	1.00[JPT][hapmap]
rs59193819	0.81[EUR][1000 genomes]
rs6548617	1.00[JPT][hapmap]
rs6772979	1.00[JPT][hapmap]
rs6801676	0.82[EUR][1000 genomes]
rs6803667	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs7611676	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs7611697	0.89[YRI][hapmap]
rs7617560	0.89[YRI][hapmap]
rs7618349	1.00[ASW][hapmap];0.87[CEU][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap]
rs7622139	0.82[ASW][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.95[MKK][hapmap];0.82[YRI][hapmap];0.92[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7623349	1.00[JPT][hapmap]
rs9870375	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763281	chr3:79246361-79489765	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv460727	chr3:79264611-79406519	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv590736	chr3:79264611-79406519	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv460730	chr3:79286801-79411014	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv590737	chr3:79286801-79411014	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:79351600-79357400	Weak transcription	Fetal Heart	heart
2	chr3:79355800-79357800	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr3:79356400-79357600	Weak transcription	Fetal Lung	lung
4	chr3:79356600-79357600	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr3:79356600-79363000	Weak transcription	Colon Smooth Muscle	Colon
6	chr3:79357200-79357800	Enhancers	iPS-15b Cell Line	embryonic stem cell

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