Variant report

Variant rs17536841
Chromosome Location chr18:25741984-25741985
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:25717600-25753400 Weak transcription Dnd41 blood
2 chr18:25726000-25745400 Enhancers Cortex derived primary cultured neurospheres brain
3 chr18:25728800-25754200 Weak transcription HUVEC blood vessel
4 chr18:25733600-25743400 Weak transcription Fetal Brain Male brain
5 chr18:25734000-25743200 Weak transcription Fetal Brain Female brain
6 chr18:25734400-25742200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr18:25734600-25748200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr18:25734800-25749200 Weak transcription Fetal Kidney kidney
9 chr18:25736000-25742200 Weak transcription H9 Cell Line embryonic stem cell
10 chr18:25736800-25747400 Enhancers Liver Liver
11 chr18:25737200-25743600 Enhancers Fetal Adrenal Gland Adrenal Gland
12 chr18:25738200-25742800 Enhancers ES-I3 Cell Line embryonic stem cell
13 chr18:25738600-25742200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr18:25738600-25743000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr18:25738600-25743200 Weak transcription Brain Hippocampus Middle brain
16 chr18:25738800-25754200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr18:25739200-25743600 Enhancers HepG2 liver
18 chr18:25739200-25747200 Weak transcription Brain Cingulate Gyrus brain
19 chr18:25739400-25742000 Weak transcription A549 lung
20 chr18:25739400-25742200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr18:25739400-25742200 Weak transcription Brain Angular Gyrus brain
22 chr18:25739400-25742200 Weak transcription Fetal Intestine Small intestine
23 chr18:25739400-25742400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr18:25739400-25742600 Weak transcription Brain Anterior Caudate brain
25 chr18:25739400-25751800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr18:25739600-25742200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr18:25740200-25743000 Enhancers Right Atrium heart
28 chr18:25740600-25742400 Enhancers HUES48 Cell Line embryonic stem cell
29 chr18:25740600-25743800 Enhancers Osteobl bone
30 chr18:25740800-25742200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr18:25740800-25742400 Weak transcription Right Ventricle heart
32 chr18:25740800-25743200 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr18:25741000-25742200 Weak transcription H1 Cell Line embryonic stem cell
34 chr18:25741000-25742200 Weak transcription Brain Germinal Matrix brain
35 chr18:25741000-25746800 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr18:25741200-25742200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr18:25741200-25744800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
38 chr18:25741200-25753200 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr18:25741400-25742000 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr18:25741600-25742400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
41 chr18:25741600-25743400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr18:25741600-25743400 Enhancers HUES6 Cell Line embryonic stem cell
43 chr18:25741600-25743600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr18:25741600-25743600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
45 chr18:25741600-25743600 Enhancers HSMM muscle
46 chr18:25741800-25742000 Enhancers iPS-15b Cell Line embryonic stem cell
47 chr18:25741800-25742400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr18:25741800-25742800 Flanking Active TSS Fetal Heart heart
49 chr18:25741800-25743000 Enhancers ES-WA7 Cell Line embryonic stem cell
50 chr18:25741800-25743400 Enhancers Fetal Intestine Large intestine

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