Variant report

Variant	rs1757200
Chromosome Location	chr10:18529835-18529836
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1277744	0.80[GIH][hapmap];0.88[TSI][hapmap]
rs1757199	1.00[CEU][hapmap];0.90[JPT][hapmap];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1757222	0.89[CEU][hapmap];0.86[CHB][hapmap];0.92[GIH][hapmap];0.85[JPT][hapmap];1.00[MEX][hapmap];0.94[TSI][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1779229	0.81[JPT][hapmap]
rs1892008	0.81[JPT][hapmap]
rs2255266	0.84[EUR][1000 genomes]
rs2489199	0.80[GIH][hapmap];0.82[MEX][hapmap];0.89[TSI][hapmap]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18515800-18532000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr10:18523000-18549400	Weak transcription	Pancreas	Pancrea
3	chr10:18523200-18536000	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr10:18526000-18532200	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr10:18526200-18536000	Weak transcription	Right Atrium	heart
6	chr10:18527000-18548800	Weak transcription	Stomach Smooth Muscle	stomach
7	chr10:18527400-18530000	Enhancers	Fetal Heart	heart
8	chr10:18528600-18530000	Enhancers	Muscle Satellite Cultured Cells	--
9	chr10:18528800-18530000	Enhancers	Fetal Lung	lung
10	chr10:18529000-18530200	Enhancers	Osteobl	bone
11	chr10:18529200-18530400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr10:18529400-18530000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr10:18529400-18530000	Enhancers	Primary monocytes fromperipheralblood	blood
14	chr10:18529400-18530000	Enhancers	Placenta	Placenta
15	chr10:18529600-18530000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr10:18529600-18530000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr10:18529600-18530000	Enhancers	Esophagus	oesophagus
18	chr10:18529600-18530000	Flanking Active TSS	Ovary	ovary
19	chr10:18529600-18530200	Enhancers	Left Ventricle	heart
20	chr10:18529800-18530000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr10:18529800-18530000	Enhancers	NHLF	lung

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