Variant report

Variant	rs1757199
Chromosome Location	chr10:18533494-18533495
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11591660	1.00[YRI][hapmap]
rs1277744	0.82[CHB][hapmap]
rs1277753	0.82[CHB][hapmap]
rs1757200	1.00[CEU][hapmap];0.90[JPT][hapmap];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1757222	0.88[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1779229	0.90[JPT][hapmap];0.86[ASN][1000 genomes]
rs1892008	0.90[JPT][hapmap];0.87[ASN][1000 genomes]
rs2255266	0.90[JPT][hapmap];0.87[ASN][1000 genomes]
rs2482109	0.93[AFR][1000 genomes]
rs2482111	0.81[AFR][1000 genomes]
rs2489199	0.82[CHB][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18523000-18549400	Weak transcription	Pancreas	Pancrea
2	chr10:18523200-18536000	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr10:18526200-18536000	Weak transcription	Right Atrium	heart
4	chr10:18527000-18548800	Weak transcription	Stomach Smooth Muscle	stomach
5	chr10:18530000-18545200	Weak transcription	Fetal Lung	lung
6	chr10:18530200-18535800	Weak transcription	Left Ventricle	heart
7	chr10:18530200-18543600	Weak transcription	Ovary	ovary
8	chr10:18530600-18534200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr10:18532800-18534600	Weak transcription	Pancreatic Islets	Pancreatic Islet
10	chr10:18533000-18535800	Weak transcription	Fetal Heart	heart
11	chr10:18533000-18540800	Weak transcription	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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