Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10237206	0.81[AMR][1000 genomes]
rs10251668	0.81[AMR][1000 genomes]
rs10486706	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1117542	0.97[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17622696	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17622724	0.97[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs17622929	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17622952	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17623051	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17623158	0.87[AMR][1000 genomes]
rs17623425	0.87[AMR][1000 genomes]
rs17690070	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17690104	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17690295	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17690378	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17690408	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17690493	0.87[AMR][1000 genomes]
rs28473068	0.81[AMR][1000 genomes]
rs28627677	0.81[AMR][1000 genomes]
rs41409244	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41449551	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56297695	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58334883	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58767715	0.80[AMR][1000 genomes]
rs59566101	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73319570	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1034605	chr7:41096638-41222426	Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:41098600-41104600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr7:41099200-41104800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr7:41099600-41104800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr7:41100000-41104600	Weak transcription	HMEC	breast
5	chr7:41101000-41113000	Weak transcription	Aorta	Aorta
6	chr7:41101000-41117800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr7:41102600-41103800	Enhancers	Primary neutrophils fromperipheralblood	blood

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