Variant report

Variant	rs17724951
Chromosome Location	chr6:145927438-145927439
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs17054153	0.82[CHB][hapmap];1.00[AFR][1000 genomes]
rs17075370	0.82[CHB][hapmap];1.00[AFR][1000 genomes]
rs17075385	0.82[CHB][hapmap];1.00[AFR][1000 genomes]
rs17075389	1.00[AFR][1000 genomes]
rs17724957	1.00[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs17725045	1.00[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs17725081	1.00[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs17725112	1.00[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs17725154	1.00[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs17797768	0.93[ASN][1000 genomes]
rs17797774	0.93[ASN][1000 genomes]
rs17797949	1.00[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs17798033	1.00[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs17798183	1.00[AFR][1000 genomes]
rs17798189	1.00[AFR][1000 genomes]
rs17798207	1.00[AFR][1000 genomes]
rs2143065	1.00[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs58658594	0.93[ASN][1000 genomes]
rs61358848	0.88[ASN][1000 genomes]
rs61638226	0.88[ASN][1000 genomes]
rs73579444	0.83[ASN][1000 genomes]
rs9497351	0.98[ASN][1000 genomes]
rs999859	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv970064	chr6:145921494-145933513	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3337202	chr6:145927074-145927566	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:145924400-145948200	Weak transcription	Left Ventricle	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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