Variant report

Variant rs17751695
Chromosome Location chr6:56560764-56560765
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56546200-56564800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr6:56547400-56561600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:56549600-56573600 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr6:56549800-56578000 Weak transcription Gastric stomach
5 chr6:56554000-56574600 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr6:56555400-56574600 Weak transcription H1 Cell Line embryonic stem cell
7 chr6:56555800-56561200 Enhancers HUVEC blood vessel
8 chr6:56555800-56561800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr6:56555800-56573600 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr6:56556000-56568400 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr6:56556200-56573600 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr6:56556200-56574400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr6:56556400-56561800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr6:56556400-56568000 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr6:56558200-56561200 Weak transcription Left Ventricle heart
16 chr6:56558200-56561800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr6:56558200-56562000 Weak transcription H9 Cell Line embryonic stem cell
18 chr6:56558200-56563400 Weak transcription Primary monocytes fromperipheralblood blood
19 chr6:56558200-56563600 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr6:56558200-56569800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr6:56558200-56573400 Weak transcription Stomach Mucosa stomach
22 chr6:56558200-56578200 Weak transcription Aorta Aorta
23 chr6:56558400-56561000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr6:56558400-56561000 Enhancers Hela-S3 cervix
25 chr6:56558400-56561200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr6:56558400-56561800 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr6:56558400-56561800 Weak transcription Psoas Muscle Psoas
28 chr6:56558400-56561800 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr6:56558400-56562200 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr6:56558400-56562400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr6:56558400-56563400 Weak transcription Brain Angular Gyrus brain
32 chr6:56558400-56563600 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr6:56558400-56563600 Weak transcription Stomach Smooth Muscle stomach
34 chr6:56558400-56566400 Weak transcription Colon Smooth Muscle Colon
35 chr6:56558400-56567000 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr6:56558400-56571600 Weak transcription Fetal Stomach stomach
37 chr6:56558400-56573200 Weak transcription Adipose Nuclei Adipose
38 chr6:56558400-56577800 Weak transcription Ovary ovary
39 chr6:56558400-56579400 Weak transcription Right Ventricle heart
40 chr6:56558600-56561000 Enhancers Muscle Satellite Cultured Cells --
41 chr6:56558600-56562000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr6:56558600-56566400 Weak transcription Rectal Smooth Muscle rectum
43 chr6:56558600-56577800 Weak transcription Fetal Heart heart
44 chr6:56559200-56563000 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
45 chr6:56559400-56562000 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr6:56559400-56563000 Strong transcription HSMMtube muscle
47 chr6:56559400-56563800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr6:56559600-56562600 Weak transcription Liver Liver
49 chr6:56559600-56563200 Strong transcription HSMM muscle
50 chr6:56559600-56572600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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