The 2.0 version of rSNPBase

Variant report

Variant rs34566275
Chromosome Location chr6:56604928-56604929
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56582600-56611600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr6:56590200-56607000 Weak transcription Pancreas Pancrea
3 chr6:56590600-56605200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr6:56592800-56605000 Weak transcription H9 Cell Line embryonic stem cell
5 chr6:56592800-56606000 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr6:56592800-56606800 Weak transcription Aorta Aorta
7 chr6:56592800-56611800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr6:56593200-56621200 Weak transcription Fetal Muscle Leg muscle
9 chr6:56593400-56605200 Weak transcription H1 Cell Line embryonic stem cell
10 chr6:56593400-56605400 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr6:56593400-56606800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr6:56593600-56605000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr6:56594800-56605000 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr6:56594800-56607000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr6:56595200-56605000 Weak transcription Fetal Intestine Small intestine
16 chr6:56596000-56605000 Weak transcription Adipose Nuclei Adipose
17 chr6:56596400-56606200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr6:56596400-56606600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr6:56596400-56606800 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr6:56597400-56606000 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr6:56597800-56605000 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr6:56597800-56606000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr6:56598000-56605000 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr6:56598000-56606600 Weak transcription Fetal Stomach stomach
25 chr6:56598000-56607000 Weak transcription Gastric stomach
26 chr6:56598400-56606600 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr6:56598400-56607000 Weak transcription HUVEC blood vessel
28 chr6:56598600-56605000 Weak transcription HSMMtube muscle
29 chr6:56599200-56605000 Weak transcription NHLF lung
30 chr6:56599400-56605200 Weak transcription A549 lung
31 chr6:56599400-56607200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr6:56599800-56605000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr6:56599800-56605000 Weak transcription Primary monocytes fromperipheralblood blood
34 chr6:56599800-56605000 Weak transcription Muscle Satellite Cultured Cells --
35 chr6:56600000-56605200 Weak transcription Osteobl bone
36 chr6:56600600-56606000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr6:56600600-56606800 Weak transcription NHDF-Ad bronchial
38 chr6:56602200-56607000 Enhancers Brain Hippocampus Middle brain
39 chr6:56603000-56606200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr6:56603400-56605600 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr6:56603400-56605600 Enhancers Left Ventricle heart
42 chr6:56603400-56607000 Enhancers Brain Inferior Temporal Lobe brain
43 chr6:56603600-56606800 Enhancers Brain Cingulate Gyrus brain
44 chr6:56603600-56606800 Enhancers Brain Substantia Nigra brain
45 chr6:56603800-56605000 Weak transcription Ovary ovary
46 chr6:56603800-56605000 Weak transcription Psoas Muscle Psoas
47 chr6:56604000-56606800 Enhancers Brain Angular Gyrus brain
48 chr6:56604200-56605000 Weak transcription Rectal Smooth Muscle rectum
49 chr6:56604200-56605000 Weak transcription GM12878-XiMat blood
50 chr6:56604200-56605000 Enhancers HepG2 liver

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Last update: Aug 31, 2015