Variant report

Variant rs59432342
Chromosome Location chr6:56662304-56662305
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56654400-56662400 Enhancers Brain Substantia Nigra brain
2 chr6:56654600-56663000 Enhancers Brain Hippocampus Middle brain
3 chr6:56654600-56664400 Enhancers Skeletal Muscle Male skeletal muscle
4 chr6:56655800-56667400 Weak transcription Stomach Mucosa stomach
5 chr6:56657800-56664400 Enhancers HSMMtube muscle
6 chr6:56658600-56664400 Enhancers Fetal Heart heart
7 chr6:56658800-56662400 Enhancers H9 Cell Line embryonic stem cell
8 chr6:56658800-56662400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr6:56658800-56662600 Enhancers H1 Cell Line embryonic stem cell
10 chr6:56658800-56664600 Enhancers Muscle Satellite Cultured Cells --
11 chr6:56659000-56663200 Enhancers Brain Anterior Caudate brain
12 chr6:56659000-56664200 Enhancers NHDF-Ad bronchial
13 chr6:56659200-56663200 Enhancers iPS-15b Cell Line embryonic stem cell
14 chr6:56659400-56662600 Enhancers Skeletal Muscle Female skeletal muscle
15 chr6:56659400-56663400 Enhancers ES-I3 Cell Line embryonic stem cell
16 chr6:56659400-56663400 Enhancers HUES6 Cell Line embryonic stem cell
17 chr6:56659400-56665200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr6:56659400-56674000 Weak transcription Fetal Muscle Leg muscle
19 chr6:56659600-56662800 Weak transcription Placenta Amnion Placenta Amnion
20 chr6:56659800-56662400 Enhancers HUES64 Cell Line embryonic stem cell
21 chr6:56659800-56664400 Enhancers iPS-18 Cell Line embryonic stem cell
22 chr6:56659800-56665800 Enhancers GM12878-XiMat blood
23 chr6:56659800-56667200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr6:56659800-56667400 Weak transcription Aorta Aorta
25 chr6:56659800-56671000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr6:56660000-56663000 Enhancers iPS-20b Cell Line embryonic stem cell
27 chr6:56660200-56662800 Enhancers Brain Inferior Temporal Lobe brain
28 chr6:56660200-56663200 Enhancers Rectal Smooth Muscle rectum
29 chr6:56660200-56663400 Enhancers Colon Smooth Muscle Colon
30 chr6:56660200-56664000 Enhancers NHLF lung
31 chr6:56660200-56667600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr6:56660400-56663000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr6:56660400-56663400 Enhancers Adipose Nuclei Adipose
34 chr6:56660600-56662400 Enhancers HUES48 Cell Line embryonic stem cell
35 chr6:56660600-56663000 Enhancers NH-A brain
36 chr6:56660600-56664200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr6:56660800-56662600 Enhancers Left Ventricle heart
38 chr6:56661000-56662600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr6:56661000-56663000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr6:56661000-56663000 Weak transcription Right Atrium heart
41 chr6:56661000-56664000 Enhancers Pancreatic Islets Pancreatic Islet
42 chr6:56661200-56663400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:56661200-56667600 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr6:56661400-56664200 Enhancers Osteobl bone
45 chr6:56661400-56664400 Enhancers A549 lung
46 chr6:56661400-56667400 Weak transcription HMEC breast
47 chr6:56661400-56667400 Weak transcription NHEK skin
48 chr6:56661400-56672800 Weak transcription Ovary ovary
49 chr6:56661800-56663200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr6:56661800-56667400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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