Variant report

Variant rs17751977
Chromosome Location chr6:56674618-56674619
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56668000-56679200 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr6:56668800-56682600 Weak transcription Aorta Aorta
3 chr6:56671600-56675600 Enhancers Placenta Amnion Placenta Amnion
4 chr6:56671600-56679200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr6:56671800-56675600 Enhancers Osteobl bone
6 chr6:56672000-56679000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr6:56672600-56675600 Enhancers Fetal Heart heart
8 chr6:56672600-56679800 Weak transcription Adipose Nuclei Adipose
9 chr6:56672800-56675000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr6:56673000-56678400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr6:56673400-56675200 Enhancers Psoas Muscle Psoas
12 chr6:56673400-56675600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
13 chr6:56673600-56674800 Enhancers NHDF-Ad bronchial
14 chr6:56673600-56675000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr6:56673600-56675000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:56673600-56675600 Enhancers HSMMtube muscle
17 chr6:56674000-56676000 Enhancers GM12878-XiMat blood
18 chr6:56674000-56676200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
19 chr6:56674000-56677200 Weak transcription Pancreas Pancrea
20 chr6:56674000-56679000 Weak transcription Brain Germinal Matrix brain
21 chr6:56674000-56679200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr6:56674000-56679200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr6:56674000-56679200 Weak transcription Brain Angular Gyrus brain
24 chr6:56674000-56679200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr6:56674000-56680200 Weak transcription Ovary ovary
26 chr6:56674200-56675600 Enhancers A549 lung
27 chr6:56674200-56675800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr6:56674200-56676000 Weak transcription Colon Smooth Muscle Colon
29 chr6:56674200-56676200 Enhancers Muscle Satellite Cultured Cells --
30 chr6:56674200-56678400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr6:56674200-56678600 Weak transcription Brain Anterior Caudate brain
32 chr6:56674200-56678600 Weak transcription Brain Cingulate Gyrus brain
33 chr6:56674200-56678600 Weak transcription Brain Hippocampus Middle brain
34 chr6:56674200-56679000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr6:56674200-56679000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr6:56674200-56679000 Weak transcription NHLF lung
37 chr6:56674200-56679200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr6:56674200-56679200 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr6:56674200-56679200 Weak transcription Brain Inferior Temporal Lobe brain
40 chr6:56674200-56679200 Weak transcription Brain Substantia Nigra brain
41 chr6:56674200-56679200 Weak transcription Left Ventricle heart
42 chr6:56674200-56679200 Weak transcription Rectal Smooth Muscle rectum
43 chr6:56674200-56679200 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr6:56674200-56682600 Weak transcription Right Ventricle heart
45 chr6:56674200-56692400 Weak transcription H1 Cell Line embryonic stem cell
46 chr6:56674200-56703000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:56674400-56674800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr6:56674400-56675600 Enhancers HSMM muscle
49 chr6:56674400-56678600 Weak transcription NH-A brain
50 chr6:56674400-56679200 Weak transcription Cortex derived primary cultured neurospheres brain

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