Variant report

Variant rs10498812
Chromosome Location chr6:56684210-56684211
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56674200-56692400 Weak transcription H1 Cell Line embryonic stem cell
2 chr6:56674200-56703000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr6:56674600-56686400 Weak transcription HUES64 Cell Line embryonic stem cell
4 chr6:56679200-56687400 Enhancers Brain Substantia Nigra brain
5 chr6:56679800-56684800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr6:56679800-56693400 Weak transcription Rectal Smooth Muscle rectum
7 chr6:56679800-56693400 Weak transcription NH-A brain
8 chr6:56680000-56684800 Weak transcription Psoas Muscle Psoas
9 chr6:56680000-56685600 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr6:56680000-56689000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr6:56680600-56685800 Weak transcription HSMM muscle
12 chr6:56680600-56686200 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr6:56680600-56690400 Weak transcription HSMMtube muscle
14 chr6:56681200-56686000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr6:56681400-56684800 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr6:56681400-56685600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr6:56681400-56686000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr6:56681400-56692600 Weak transcription Osteobl bone
19 chr6:56681400-56702200 Weak transcription H9 Cell Line embryonic stem cell
20 chr6:56681400-56702200 Weak transcription NHDF-Ad bronchial
21 chr6:56681600-56684600 Weak transcription Brain Anterior Caudate brain
22 chr6:56681600-56684800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr6:56681600-56684800 Weak transcription Brain Germinal Matrix brain
24 chr6:56681600-56684800 Weak transcription Fetal Heart heart
25 chr6:56681600-56684800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr6:56681600-56685000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr6:56681600-56685600 Weak transcription NHLF lung
28 chr6:56681600-56686000 Weak transcription Left Ventricle heart
29 chr6:56681600-56686000 Weak transcription Right Atrium heart
30 chr6:56681600-56686200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr6:56681600-56702400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr6:56682400-56684600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr6:56682600-56684800 Weak transcription A549 lung
34 chr6:56682800-56684800 Weak transcription Muscle Satellite Cultured Cells --
35 chr6:56682800-56685000 Weak transcription Colon Smooth Muscle Colon
36 chr6:56683000-56692600 Weak transcription Right Ventricle heart
37 chr6:56683200-56685600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr6:56683400-56684800 Weak transcription Brain Cingulate Gyrus brain
39 chr6:56683400-56685200 Enhancers iPS-15b Cell Line embryonic stem cell
40 chr6:56683600-56684400 Enhancers HUES48 Cell Line embryonic stem cell
41 chr6:56683600-56687200 Enhancers Brain Inferior Temporal Lobe brain
42 chr6:56684000-56684800 Weak transcription Brain Angular Gyrus brain
43 chr6:56684000-56685400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr6:56684000-56685600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr6:56684000-56685800 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr6:56684000-56686000 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr6:56684000-56689200 Weak transcription HUVEC blood vessel
48 chr6:56684000-56690600 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr6:56684000-56703800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr6:56684200-56684600 Weak transcription Brain Hippocampus Middle brain

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