Variant report

Variant rs11756551
Chromosome Location chr6:56650494-56650495
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56638000-56653000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:56638000-56654200 Weak transcription Brain Inferior Temporal Lobe brain
3 chr6:56638000-56654400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr6:56638000-56654800 Weak transcription Psoas Muscle Psoas
5 chr6:56638000-56659200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr6:56638000-56659200 Weak transcription NHLF lung
7 chr6:56638200-56651200 Weak transcription HSMMtube muscle
8 chr6:56638400-56655000 Weak transcription Muscle Satellite Cultured Cells --
9 chr6:56641200-56654800 Weak transcription HUVEC blood vessel
10 chr6:56641200-56659000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr6:56642400-56654800 Weak transcription Brain Angular Gyrus brain
12 chr6:56642600-56650600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr6:56642600-56650600 Weak transcription HSMM muscle
14 chr6:56642600-56651000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr6:56642600-56654000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:56642600-56654600 Weak transcription A549 lung
17 chr6:56642600-56659400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr6:56642800-56658800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr6:56643000-56654600 Weak transcription Brain Hippocampus Middle brain
20 chr6:56647000-56659000 Weak transcription NHDF-Ad bronchial
21 chr6:56647200-56651800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr6:56647600-56654400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr6:56649200-56652800 Weak transcription Fetal Brain Female brain
24 chr6:56649800-56650800 Strong transcription Brain Germinal Matrix brain
25 chr6:56650000-56651200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr6:56650200-56650600 Flanking Active TSS H1 Cell Line embryonic stem cell
27 chr6:56650200-56650600 Active TSS HUES64 Cell Line embryonic stem cell
28 chr6:56650200-56650600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:56650200-56650600 Active TSS iPS-20b Cell Line embryonic stem cell
30 chr6:56650200-56650600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
31 chr6:56650200-56650600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
32 chr6:56650200-56650600 Active TSS Placenta Placenta
33 chr6:56650200-56650800 Active TSS H9 Cell Line embryonic stem cell
34 chr6:56650200-56650800 Active TSS HUES6 Cell Line embryonic stem cell
35 chr6:56650200-56650800 Active TSS iPS-18 Cell Line embryonic stem cell
36 chr6:56650200-56651000 Active TSS iPS-15b Cell Line embryonic stem cell
37 chr6:56650200-56654000 Weak transcription HMEC breast
38 chr6:56650400-56650600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
39 chr6:56650400-56651000 Strong transcription Cortex derived primary cultured neurospheres brain

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