Variant report

Variant rs62411367
Chromosome Location chr6:56638727-56638728
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56625600-56649800 Weak transcription Brain Germinal Matrix brain
2 chr6:56629400-56640400 Weak transcription Adipose Nuclei Adipose
3 chr6:56633400-56640400 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr6:56636400-56640000 Enhancers HUES48 Cell Line embryonic stem cell
5 chr6:56636400-56640400 Enhancers HUES64 Cell Line embryonic stem cell
6 chr6:56637800-56640400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr6:56637800-56647200 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr6:56638000-56639400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
9 chr6:56638000-56639400 Enhancers GM12878-XiMat blood
10 chr6:56638000-56639800 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr6:56638000-56639800 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr6:56638000-56640000 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr6:56638000-56640000 Weak transcription H1 Cell Line embryonic stem cell
14 chr6:56638000-56640000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr6:56638000-56640000 Weak transcription H9 Cell Line embryonic stem cell
16 chr6:56638000-56640200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr6:56638000-56640400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr6:56638000-56640400 Weak transcription Brain Hippocampus Middle brain
19 chr6:56638000-56640400 Weak transcription Brain Substantia Nigra brain
20 chr6:56638000-56640400 Weak transcription Left Ventricle heart
21 chr6:56638000-56640400 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr6:56638000-56640600 Weak transcription Brain Anterior Caudate brain
23 chr6:56638000-56640600 Weak transcription Ovary ovary
24 chr6:56638000-56641600 Weak transcription Brain Angular Gyrus brain
25 chr6:56638000-56641800 Weak transcription Brain Cingulate Gyrus brain
26 chr6:56638000-56642200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr6:56638000-56642200 Weak transcription Colon Smooth Muscle Colon
28 chr6:56638000-56642200 Weak transcription Right Atrium heart
29 chr6:56638000-56642200 Weak transcription A549 lung
30 chr6:56638000-56650200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr6:56638000-56653000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr6:56638000-56654200 Weak transcription Brain Inferior Temporal Lobe brain
33 chr6:56638000-56654400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr6:56638000-56654800 Weak transcription Psoas Muscle Psoas
35 chr6:56638000-56659200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr6:56638000-56659200 Weak transcription NHLF lung
37 chr6:56638200-56639200 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr6:56638200-56639800 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr6:56638200-56640000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr6:56638200-56641800 Weak transcription Rectal Smooth Muscle rectum
41 chr6:56638200-56642200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr6:56638200-56651200 Weak transcription HSMMtube muscle
43 chr6:56638400-56639800 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr6:56638400-56640200 Weak transcription HUVEC blood vessel
45 chr6:56638400-56640400 Weak transcription Fetal Heart heart
46 chr6:56638400-56640400 Weak transcription HSMM muscle
47 chr6:56638400-56640800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr6:56638400-56642000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr6:56638400-56642200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr6:56638400-56647800 Weak transcription NH-A brain

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