Variant report

Variant rs62411366
Chromosome Location chr6:56637813-56637814
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56625600-56649800 Weak transcription Brain Germinal Matrix brain
2 chr6:56628200-56638400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr6:56628400-56638400 Enhancers Osteobl bone
4 chr6:56628600-56638200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr6:56628600-56638400 Enhancers HSMM muscle
6 chr6:56629400-56640400 Weak transcription Adipose Nuclei Adipose
7 chr6:56630000-56638000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr6:56630000-56638200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr6:56630000-56638400 Enhancers Muscle Satellite Cultured Cells --
10 chr6:56630200-56638200 Enhancers HSMMtube muscle
11 chr6:56633000-56638400 Enhancers Fetal Heart heart
12 chr6:56633400-56638400 Enhancers NHDF-Ad bronchial
13 chr6:56633400-56640400 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr6:56634800-56638400 Enhancers NH-A brain
15 chr6:56635000-56638000 Enhancers NHLF lung
16 chr6:56635600-56638400 Enhancers HUVEC blood vessel
17 chr6:56635800-56638000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:56636000-56638000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
19 chr6:56636000-56638000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:56636000-56638000 Enhancers Brain Hippocampus Middle brain
21 chr6:56636000-56638000 Enhancers Brain Substantia Nigra brain
22 chr6:56636000-56638000 Enhancers Colon Smooth Muscle Colon
23 chr6:56636000-56638000 Enhancers A549 lung
24 chr6:56636000-56638200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr6:56636000-56638400 Enhancers NHEK skin
26 chr6:56636400-56640000 Enhancers HUES48 Cell Line embryonic stem cell
27 chr6:56636400-56640400 Enhancers HUES64 Cell Line embryonic stem cell
28 chr6:56636600-56638000 Enhancers Brain Cingulate Gyrus brain
29 chr6:56636600-56638200 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr6:56636800-56638200 Enhancers iPS-18 Cell Line embryonic stem cell
31 chr6:56637000-56638000 Enhancers ES-WA7 Cell Line embryonic stem cell
32 chr6:56637000-56638000 Enhancers H1 Cell Line embryonic stem cell
33 chr6:56637000-56638000 Enhancers HUES6 Cell Line embryonic stem cell
34 chr6:56637000-56638400 Enhancers iPS-20b Cell Line embryonic stem cell
35 chr6:56637200-56638000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr6:56637200-56638000 Enhancers H9 Cell Line embryonic stem cell
37 chr6:56637200-56638000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
38 chr6:56637200-56638000 Enhancers Psoas Muscle Psoas
39 chr6:56637200-56638400 Enhancers Right Ventricle heart
40 chr6:56637400-56638000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr6:56637400-56638000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
42 chr6:56637400-56638000 Enhancers iPS-15b Cell Line embryonic stem cell
43 chr6:56637400-56638000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr6:56637400-56638000 Enhancers HMEC breast
45 chr6:56637400-56638200 Enhancers Rectal Smooth Muscle rectum
46 chr6:56637600-56638000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr6:56637600-56638000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
48 chr6:56637600-56638000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
49 chr6:56637600-56638000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
50 chr6:56637600-56638000 Enhancers Brain Angular Gyrus brain

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