Variant report

Variant rs13204466
Chromosome Location chr6:56652174-56652175
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56638000-56653000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:56638000-56654200 Weak transcription Brain Inferior Temporal Lobe brain
3 chr6:56638000-56654400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr6:56638000-56654800 Weak transcription Psoas Muscle Psoas
5 chr6:56638000-56659200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr6:56638000-56659200 Weak transcription NHLF lung
7 chr6:56638400-56655000 Weak transcription Muscle Satellite Cultured Cells --
8 chr6:56641200-56654800 Weak transcription HUVEC blood vessel
9 chr6:56641200-56659000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr6:56642400-56654800 Weak transcription Brain Angular Gyrus brain
11 chr6:56642600-56654000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr6:56642600-56654600 Weak transcription A549 lung
13 chr6:56642600-56659400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr6:56642800-56658800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr6:56643000-56654600 Weak transcription Brain Hippocampus Middle brain
16 chr6:56647000-56659000 Weak transcription NHDF-Ad bronchial
17 chr6:56647600-56654400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr6:56649200-56652800 Weak transcription Fetal Brain Female brain
19 chr6:56650200-56654000 Weak transcription HMEC breast
20 chr6:56650600-56658800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr6:56650600-56659200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr6:56650600-56659200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr6:56650800-56652400 Enhancers Skeletal Muscle Male skeletal muscle
24 chr6:56650800-56653800 ZNF genes & repeats GM12878-XiMat blood
25 chr6:56650800-56659600 Weak transcription Brain Germinal Matrix brain
26 chr6:56651000-56652200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr6:56651000-56654600 Weak transcription Brain Cingulate Gyrus brain
28 chr6:56651000-56655400 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr6:56651000-56655800 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr6:56651000-56658000 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr6:56651000-56658000 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr6:56651000-56658000 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr6:56651000-56659200 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr6:56651200-56652400 Enhancers HSMMtube muscle
35 chr6:56651200-56654400 Weak transcription Adipose Nuclei Adipose
36 chr6:56651200-56659000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr6:56651200-56659400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr6:56651200-56660200 Weak transcription HSMM muscle
39 chr6:56651400-56654400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr6:56651400-56654400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr6:56651400-56654400 Weak transcription Brain Anterior Caudate brain
42 chr6:56651400-56654400 Weak transcription Brain Substantia Nigra brain
43 chr6:56651600-56652200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr6:56651600-56652600 Weak transcription Left Ventricle heart
45 chr6:56651800-56652200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr6:56651800-56655600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr6:56651800-56659000 Weak transcription Osteobl bone
48 chr6:56651800-56659200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr6:56652000-56654400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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