Variant report
Variant | rs71564848 |
---|---|
Chromosome Location | chr6:56549053-56549054 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:56526400-56549200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
2 | chr6:56527000-56554400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
3 | chr6:56529600-56553800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
4 | chr6:56535200-56555200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
5 | chr6:56535600-56549200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
6 | chr6:56537000-56551800 | Weak transcription | Esophagus | oesophagus |
7 | chr6:56537200-56553400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
8 | chr6:56537200-56555200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
9 | chr6:56537600-56552600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
10 | chr6:56537600-56553600 | Weak transcription | Fetal Stomach | stomach |
11 | chr6:56537800-56549400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
12 | chr6:56538000-56549200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
13 | chr6:56543000-56559400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
14 | chr6:56544200-56549200 | Weak transcription | Right Atrium | heart |
15 | chr6:56545600-56553400 | Enhancers | Brain Hippocampus Middle | brain |
16 | chr6:56546200-56552400 | Enhancers | Brain Substantia Nigra | brain |
17 | chr6:56546200-56564800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
18 | chr6:56546800-56555400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
19 | chr6:56547000-56549800 | Enhancers | Sigmoid Colon | Sigmoid Colon |
20 | chr6:56547200-56549200 | Enhancers | HepG2 | liver |
21 | chr6:56547200-56552200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
22 | chr6:56547200-56552400 | Enhancers | Brain Angular Gyrus | brain |
23 | chr6:56547200-56553400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
24 | chr6:56547200-56554000 | Enhancers | Brain Cingulate Gyrus | brain |
25 | chr6:56547200-56557400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
26 | chr6:56547400-56549200 | Enhancers | Fetal Intestine Small | intestine |
27 | chr6:56547400-56549600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
28 | chr6:56547400-56549600 | Enhancers | Colon Smooth Muscle | Colon |
29 | chr6:56547400-56552400 | Enhancers | Brain Inferior Temporal Lobe | brain |
30 | chr6:56547400-56552400 | Enhancers | Ovary | ovary |
31 | chr6:56547400-56552800 | Enhancers | Brain Anterior Caudate | brain |
32 | chr6:56547400-56561600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
33 | chr6:56547600-56549200 | Weak transcription | Left Ventricle | heart |
34 | chr6:56547600-56549600 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
35 | chr6:56547600-56550400 | Enhancers | Fetal Lung | lung |
36 | chr6:56547800-56549200 | Weak transcription | Fetal Muscle Leg | muscle |
37 | chr6:56547800-56549400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
38 | chr6:56547800-56549600 | Enhancers | Pancreatic Islets | Pancreatic Islet |
39 | chr6:56547800-56549800 | Strong transcription | GM12878-XiMat | blood |
40 | chr6:56547800-56551800 | Weak transcription | Right Ventricle | heart |
41 | chr6:56548000-56549400 | Enhancers | Rectal Mucosa Donor 31 | rectum |
42 | chr6:56548000-56549400 | Enhancers | NHEK | skin |
43 | chr6:56548000-56549600 | Enhancers | Stomach Mucosa | stomach |
44 | chr6:56548000-56549600 | Enhancers | HMEC | breast |
45 | chr6:56548000-56551000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
46 | chr6:56548200-56549400 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
47 | chr6:56548200-56549400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
48 | chr6:56548200-56549600 | Enhancers | NHLF | lung |
49 | chr6:56548200-56549800 | Enhancers | Fetal Intestine Large | intestine |
50 | chr6:56548200-56550000 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |