Variant report

No.	Distal block	Cell Line	Cell type
1	chr11:34022633..34024172-chr11:34031611..34033900,2	K562	blood:
2	chr11:34022711..34024246-chr11:34066496..34068004,2	MCF-7	breast:
3	chr11:34022409..34025980-chr11:34071309..34074224,5	MCF-7	breast:
4	chr11:34022810..34025510-chr11:34071927..34075511,3	MCF-7	breast:
5	chr11:34021383..34024152-chr11:34378866..34381004,2	K562	blood:

Variant related genes	Relation type
ENSG00000135387	Chromatin interaction
ENSG00000166016	Chromatin interaction

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10501131	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10836150	0.80[CEU][hapmap];0.90[GIH][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap]
rs11601630	0.84[GIH][hapmap]
rs16925114	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs16925153	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs16925167	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs16925170	0.91[GIH][hapmap]
rs16925175	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs16925182	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs16925183	0.84[GIH][hapmap]
rs16925184	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs17367679	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs17699517	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs17700132	0.84[GIH][hapmap];1.00[MEX][hapmap]
rs17700360	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs17700714	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs17778759	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs2421459	0.80[CEU][hapmap];1.00[GIH][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap]
rs2467392	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs2473929	0.84[GIH][hapmap]
rs2957509	0.91[GIH][hapmap]
rs2957514	0.91[GIH][hapmap]
rs2957518	0.90[GIH][hapmap]
rs2982587	0.91[GIH][hapmap]
rs2982619	0.91[GIH][hapmap];1.00[MEX][hapmap]
rs4587708	0.91[GIH][hapmap]
rs4756095	0.91[GIH][hapmap]

mRNA abundance (count:7)

SNP	Gene	Cis/trans	Tissue	Source
rs17771070	CD59	cis	parietal	SCAN
rs17771070	NAT10	cis	cerebellum	SCAN
rs17771070	NAT10	cis	parietal	SCAN
rs17771070	NBAS	trans	parietal	SCAN
rs17771070	FBXO3	cis	parietal	SCAN
rs17771070	FBXO3	cis	cerebellum	SCAN
rs17771070	CD44	cis	parietal	SCAN

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34019600-34025400	Weak transcription	Fetal Intestine Large	intestine
2	chr11:34019800-34026000	Weak transcription	HepG2	liver
3	chr11:34020400-34028000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr11:34023400-34024400	Enhancers	Placenta	Placenta
5	chr11:34023600-34024400	Enhancers	GM12878-XiMat	blood
6	chr11:34023800-34024400	Bivalent Enhancer	HSMMtube	muscle
7	chr11:34023800-34024600	Enhancers	Duodenum Mucosa	Duodenum
8	chr11:34023800-34024800	Enhancers	Rectal Mucosa Donor 31	rectum
9	chr11:34024000-34024200	Enhancers	Fetal Muscle Trunk	muscle
10	chr11:34024000-34024400	Enhancers	Fetal Intestine Small	intestine
11	chr11:34024000-34025000	Enhancers	Pancreas	Pancrea

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