The 2.0 version of rSNPBase

Variant report

Variant rs17786528
Chromosome Location chr6:79924991-79924992
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:79883000-79925000 Weak transcription Pancreas Pancrea
2 chr6:79901200-79927000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr6:79904200-79925000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr6:79906800-79935600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr6:79907200-79926000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr6:79907400-79942800 Weak transcription HSMM muscle
7 chr6:79907600-79940800 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr6:79908400-79938600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr6:79910200-79925000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr6:79910800-79935600 Weak transcription NHEK skin
11 chr6:79911000-79928800 Weak transcription Brain Substantia Nigra brain
12 chr6:79912400-79940600 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr6:79912600-79925000 Weak transcription Brain Inferior Temporal Lobe brain
14 chr6:79912600-79927600 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr6:79912600-79931000 Weak transcription Rectal Smooth Muscle rectum
16 chr6:79912800-79926600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr6:79912800-79942600 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr6:79913200-79926400 Weak transcription Muscle Satellite Cultured Cells --
19 chr6:79913200-79943000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr6:79913200-79943200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr6:79916400-79925200 Weak transcription HMEC breast
22 chr6:79916400-79930400 Weak transcription Brain Germinal Matrix brain
23 chr6:79916400-79935400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr6:79916400-79943200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr6:79916600-79925000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr6:79916600-79925200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr6:79916600-79927600 Weak transcription Esophagus oesophagus
28 chr6:79916600-79933000 Weak transcription Spleen Spleen
29 chr6:79916800-79925000 Weak transcription Lung lung
30 chr6:79916800-79927600 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr6:79917800-79929200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:79917800-79929600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr6:79917800-79941000 Weak transcription Hela-S3 cervix
34 chr6:79918000-79925000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr6:79918200-79926800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr6:79918200-79942000 Weak transcription Primary T cells fromperipheralblood blood
37 chr6:79919800-79925000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr6:79920000-79926600 Weak transcription Primary B cells from peripheral blood blood
39 chr6:79920200-79925000 Weak transcription Placenta Placenta
40 chr6:79920200-79925000 Weak transcription Right Atrium heart
41 chr6:79920200-79926000 Weak transcription Primary monocytes fromperipheralblood blood
42 chr6:79920200-79926400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr6:79920200-79926400 Weak transcription Brain Cingulate Gyrus brain
44 chr6:79920200-79927400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr6:79920200-79928800 Weak transcription GM12878-XiMat blood
46 chr6:79920200-79933400 Weak transcription Primary hematopoietic stem cells blood
47 chr6:79920400-79925000 Weak transcription Fetal Muscle Leg muscle
48 chr6:79920400-79926800 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr6:79920400-79927000 Weak transcription H1 Cell Line embryonic stem cell
50 chr6:79920400-79927000 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015