The 2.0 version of rSNPBase

Variant report

Variant rs72904885
Chromosome Location chr6:79784098-79784099
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:79704600-79786600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:79707400-79786000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr6:79707400-79786600 Weak transcription Esophagus oesophagus
4 chr6:79730000-79786600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr6:79742000-79785400 Weak transcription HSMMtube muscle
6 chr6:79755000-79785400 Weak transcription Colonic Mucosa Colon
7 chr6:79760600-79785400 Weak transcription Right Ventricle heart
8 chr6:79760600-79786800 Weak transcription Spleen Spleen
9 chr6:79768600-79786400 Weak transcription Placenta Amnion Placenta Amnion
10 chr6:79769800-79785400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr6:79770400-79784400 Weak transcription Fetal Brain Male brain
12 chr6:79770400-79784600 Weak transcription NHEK skin
13 chr6:79770400-79784800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:79770400-79784800 Weak transcription HMEC breast
15 chr6:79770400-79785000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr6:79770400-79785400 Weak transcription Thymus Thymus
17 chr6:79770400-79786600 Weak transcription Lung lung
18 chr6:79770600-79785000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr6:79770600-79785000 Weak transcription Hela-S3 cervix
20 chr6:79770600-79785400 Weak transcription Liver Liver
21 chr6:79770600-79785800 Weak transcription Fetal Muscle Trunk muscle
22 chr6:79770600-79786000 Weak transcription H9 Cell Line embryonic stem cell
23 chr6:79772000-79784800 Weak transcription H1 Cell Line embryonic stem cell
24 chr6:79773400-79785400 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr6:79775000-79785400 Weak transcription Fetal Stomach stomach
26 chr6:79775200-79785800 Weak transcription Fetal Muscle Leg muscle
27 chr6:79775200-79786600 Weak transcription Pancreas Pancrea
28 chr6:79775400-79785000 Weak transcription Adipose Nuclei Adipose
29 chr6:79775400-79786600 Weak transcription Gastric stomach
30 chr6:79777000-79786000 Weak transcription Left Ventricle heart
31 chr6:79777800-79784800 Weak transcription NH-A brain
32 chr6:79777800-79785600 Weak transcription Fetal Thymus thymus
33 chr6:79778200-79785000 Weak transcription Fetal Intestine Small intestine
34 chr6:79778200-79785800 Weak transcription Ovary ovary
35 chr6:79778400-79785400 Weak transcription Psoas Muscle Psoas
36 chr6:79779600-79784800 Enhancers Primary T helper cells PMA-I stimulated --
37 chr6:79779600-79785600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr6:79780200-79785800 Enhancers Colon Smooth Muscle Colon
39 chr6:79780400-79785000 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr6:79780400-79785000 Weak transcription Stomach Smooth Muscle stomach
41 chr6:79780600-79785600 Enhancers Primary T helper 17 cells PMA-I stimulated --
42 chr6:79781000-79784400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr6:79781000-79784400 Weak transcription NHDF-Ad bronchial
44 chr6:79781000-79784600 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr6:79781000-79784800 Weak transcription Brain Germinal Matrix brain
46 chr6:79781000-79784800 Weak transcription Duodenum Mucosa Duodenum
47 chr6:79781000-79784800 Weak transcription Fetal Kidney kidney
48 chr6:79781000-79784800 Weak transcription HSMM muscle
49 chr6:79781000-79785000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr6:79781000-79785000 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015