Variant report

Variant	rs1779383
Chromosome Location	chr10:44895357-44895358
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:51)

rs_ID	r²[population]
rs1023260	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11239048	0.92[ASN][1000 genomes]
rs1147924	0.94[ASN][1000 genomes]
rs1147926	0.94[ASN][1000 genomes]
rs1147930	0.94[ASN][1000 genomes]
rs1147931	0.94[ASN][1000 genomes]
rs1147932	0.92[ASN][1000 genomes]
rs1147954	0.89[ASN][1000 genomes]
rs1147957	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1147961	0.88[ASN][1000 genomes]
rs1147962	0.88[ASN][1000 genomes]
rs1253714	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1253718	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1253720	0.91[ASN][1000 genomes]
rs1253721	0.90[ASN][1000 genomes]
rs1253722	0.90[ASN][1000 genomes]
rs1253723	0.92[ASN][1000 genomes]
rs1253731	0.92[ASN][1000 genomes]
rs1253732	0.92[ASN][1000 genomes]
rs1253733	0.92[ASN][1000 genomes]
rs1253734	0.90[ASN][1000 genomes]
rs1253735	0.92[ASN][1000 genomes]
rs1253736	0.92[ASN][1000 genomes]
rs1253743	0.92[ASN][1000 genomes]
rs1253745	0.92[ASN][1000 genomes]
rs1253747	0.92[ASN][1000 genomes]
rs1253931	0.95[ASN][1000 genomes]
rs1253945	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1253946	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1266391	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1272678	0.92[ASN][1000 genomes]
rs1419282	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1591285	0.90[ASN][1000 genomes]
rs1628283	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1761316	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1761325	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1761331	0.85[EUR][1000 genomes]
rs1761334	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1761347	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1779343	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1779380	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1779381	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1892034	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1892035	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1892037	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs2096331	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2781548	0.92[ASN][1000 genomes]
rs2781549	0.92[ASN][1000 genomes]
rs2799712	0.87[EUR][1000 genomes]
rs750011	0.94[ASN][1000 genomes]
rs915082	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44891000-44896000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44891800-44895800	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr10:44892000-44898400	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr10:44892400-44896000	Enhancers	H1 Cell Line	embryonic stem cell
5	chr10:44892400-44896600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr10:44893400-44895400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
7	chr10:44893600-44896400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr10:44894200-44895400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr10:44894200-44895600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr10:44894200-44895600	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr10:44894200-44895800	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr10:44894600-44895400	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr10:44894600-44895400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
14	chr10:44894600-44895400	Enhancers	NHDF-Ad	bronchial
15	chr10:44895000-44895800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr10:44895000-44896200	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr10:44895000-44896400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr10:44895200-44895800	Enhancers	H9 Cell Line	embryonic stem cell
19	chr10:44895200-44896000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

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