Variant report

Variant	rs17827951
Chromosome Location	chr14:78726621-78726622
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12883643	0.85[JPT][hapmap]
rs17107186	0.82[CEU][hapmap];1.00[JPT][hapmap]
rs17754913	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17754986	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17755066	0.94[CEU][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.87[AMR][1000 genomes]
rs17827963	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17828054	0.94[CEU][hapmap];0.82[CHB][hapmap];0.85[JPT][hapmap];0.87[AMR][1000 genomes]
rs1882821	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2365680	0.94[CEU][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4903736	0.94[CEU][hapmap];1.00[JPT][hapmap]
rs4903741	0.85[JPT][hapmap]
rs7148695	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8006711	0.85[JPT][hapmap]
rs8010397	0.86[YRI][hapmap]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78710200-78729800	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr14:78721800-78730400	Weak transcription	Brain Angular Gyrus	brain
3	chr14:78722000-78729800	Weak transcription	Brain Germinal Matrix	brain
4	chr14:78724600-78730600	Weak transcription	Brain Hippocampus Middle	brain
5	chr14:78725800-78726800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr14:78725800-78726800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr14:78726200-78726800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr14:78726200-78726800	Enhancers	NH-A	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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