Variant report

Variant	rs186832
Chromosome Location	chr5:68332888-68332889
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:68327607..68329529-chr5:68331536..68333777,2	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10036073	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10078240	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10471766	0.88[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs10940194	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11742568	0.84[ASN][1000 genomes]
rs11750612	0.84[CHB][hapmap]
rs12516903	0.84[ASN][1000 genomes]
rs164795	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs164796	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs164798	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs164801	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs164802	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2076823	0.87[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs2434352	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2450236	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2450237	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs338676	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs338677	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3923114	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4246762	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4246763	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4295341	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4315885	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4410610	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4976063	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4976074	0.92[CEU][hapmap];0.86[CHB][hapmap];0.94[JPT][hapmap];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4976075	0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4976076	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4976178	0.88[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs56238212	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs60544415	0.84[ASN][1000 genomes]
rs62354528	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6414814	1.00[CHB][hapmap]
rs6450003	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6450015	0.83[ASN][1000 genomes]
rs6450016	0.83[ASN][1000 genomes]
rs7444785	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7733467	1.00[CHB][hapmap]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68330600-68339000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr5:68332400-68338400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr5:68332400-68338800	Weak transcription	NHEK	skin
4	chr5:68332800-68333000	Enhancers	K562	blood

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