Variant report

Variant rs1871695
Chromosome Location chr6:28109960-28109961
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28107800-28110800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr6:28108000-28110600 Active TSS Brain Anterior Caudate brain
3 chr6:28108000-28111000 Active TSS Rectal Mucosa Donor 29 rectum
4 chr6:28108400-28110800 Active TSS NHDF-Ad bronchial
5 chr6:28109000-28110000 Bivalent/Poised TSS Fetal Stomach stomach
6 chr6:28109000-28110200 Bivalent/Poised TSS Brain Germinal Matrix brain
7 chr6:28109000-28110200 Active TSS Fetal Adrenal Gland Adrenal Gland
8 chr6:28109000-28110400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr6:28109000-28110400 Active TSS Brain Substantia Nigra brain
10 chr6:28109000-28110400 Active TSS Pancreatic Islets Pancreatic Islet
11 chr6:28109000-28110400 Active TSS Fetal Lung lung
12 chr6:28109000-28110400 Active TSS Skeletal Muscle Male skeletal muscle
13 chr6:28109000-28110400 Active TSS HUVEC blood vessel
14 chr6:28109000-28110600 Active TSS HUES48 Cell Line embryonic stem cell
15 chr6:28109000-28110600 Active TSS Breast Myoepithelial Primary Cells Breast
16 chr6:28109000-28110600 Flanking Active TSS Primary T cells fromperipheralblood blood
17 chr6:28109000-28110600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
18 chr6:28109000-28110600 Active TSS Brain Cingulate Gyrus brain
19 chr6:28109000-28110600 Active TSS A549 lung
20 chr6:28109000-28110600 Active TSS NH-A brain
21 chr6:28109000-28110800 Active TSS HUES64 Cell Line embryonic stem cell
22 chr6:28109000-28110800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr6:28109000-28110800 Active TSS Muscle Satellite Cultured Cells --
24 chr6:28109000-28110800 Active TSS Fetal Muscle Leg muscle
25 chr6:28109000-28111000 Active TSS H1 Cell Line embryonic stem cell
26 chr6:28109000-28111000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr6:28109000-28111000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
28 chr6:28109000-28111000 Active TSS Fetal Brain Female brain
29 chr6:28109000-28111000 Active TSS HSMMtube muscle
30 chr6:28109000-28111000 Active TSS NHLF lung
31 chr6:28109000-28111400 Active TSS iPS-20b Cell Line embryonic stem cell
32 chr6:28109200-28110000 Bivalent/Poised TSS Fetal Muscle Trunk muscle
33 chr6:28109200-28110000 Transcr. at gene 5' and 3' Right Atrium heart
34 chr6:28109200-28110000 Active TSS Spleen Spleen
35 chr6:28109200-28110200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
36 chr6:28109200-28110200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
37 chr6:28109200-28110200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
38 chr6:28109200-28110200 Active TSS Fetal Brain Male brain
39 chr6:28109200-28110200 Active TSS Gastric stomach
40 chr6:28109200-28110200 Active TSS Lung lung
41 chr6:28109200-28110200 Active TSS Pancreas Pancrea
42 chr6:28109200-28110200 Active TSS Placenta Amnion Placenta Amnion
43 chr6:28109200-28110200 Active TSS Sigmoid Colon Sigmoid Colon
44 chr6:28109200-28110200 Active TSS Small Intestine intestine
45 chr6:28109200-28110400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
46 chr6:28109200-28110400 Active TSS Brain Inferior Temporal Lobe brain
47 chr6:28109200-28110400 Active TSS Colon Smooth Muscle Colon
48 chr6:28109200-28110400 Active TSS Duodenum Smooth Muscle Duodenum
49 chr6:28109200-28110400 Active TSS Fetal Intestine Large intestine
50 chr6:28109200-28110400 Active TSS Rectal Smooth Muscle rectum

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