Variant report

Variant	rs1932618
Chromosome Location	chr6:69666684-69666685
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10485436	0.95[CHD][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap]
rs13205016	0.81[GIH][hapmap]
rs13207774	0.95[CHD][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap]
rs1889879	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs3798980	0.81[GIH][hapmap]
rs3798996	0.87[GIH][hapmap]
rs3799007	0.81[GIH][hapmap]
rs3799021	0.81[GIH][hapmap]
rs3823061	0.94[GIH][hapmap];0.86[MEX][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6908180	0.87[GIH][hapmap];0.86[MEX][hapmap]
rs6919909	0.82[MEX][hapmap]
rs7761270	0.87[GIH][hapmap];0.82[MEX][hapmap]
rs9360367	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69645600-69679000	Weak transcription	Fetal Brain Female	brain
2	chr6:69646000-69685000	Weak transcription	Fetal Lung	lung
3	chr6:69646200-69677200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr6:69647600-69677800	Weak transcription	Brain Anterior Caudate	brain
5	chr6:69652200-69684600	Weak transcription	Brain Angular Gyrus	brain
6	chr6:69652800-69672800	Weak transcription	Fetal Brain Male	brain
7	chr6:69654400-69677600	Weak transcription	Brain Hippocampus Middle	brain
8	chr6:69655000-69677600	Weak transcription	Brain Substantia Nigra	brain
9	chr6:69659600-69669600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:69664200-69666800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr6:69665000-69667600	Strong transcription	Cortex derived primary cultured neurospheres	brain
12	chr6:69665200-69667600	Weak transcription	Fetal Stomach	stomach
13	chr6:69665800-69668000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr6:69666600-69677800	Weak transcription	Brain Inferior Temporal Lobe	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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