Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:82508795..82509784-chr6:82525837..82526689,2	MCF-7	breast:
2	chr6:82507285..82509817-chr6:82524544..82526925,2	MCF-7	breast:
3	chr6:82497503..82499926-chr6:82508521..82510695,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10455133	0.96[CEU][hapmap];0.85[EUR][1000 genomes]
rs10455392	0.81[CEU][hapmap]
rs12189633	0.92[EUR][1000 genomes]
rs12194273	0.81[CEU][hapmap]
rs12196654	0.81[CEU][hapmap]
rs12215262	0.81[CEU][hapmap];0.84[EUR][1000 genomes]
rs12216177	0.93[EUR][1000 genomes]
rs1291466	0.92[EUR][1000 genomes]
rs1931621	0.82[JPT][hapmap]
rs194602	0.94[EUR][1000 genomes]
rs194603	0.93[CEU][hapmap];0.93[EUR][1000 genomes]
rs194625	0.93[EUR][1000 genomes]
rs194628	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs194629	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs194630	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs194632	0.93[EUR][1000 genomes]
rs194634	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs194635	0.92[CEU][hapmap];0.93[EUR][1000 genomes]
rs194636	0.96[CEU][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6923136	0.94[EUR][1000 genomes]
rs733415	0.93[EUR][1000 genomes]
rs915123	0.92[CEU][hapmap];0.94[EUR][1000 genomes]
rs926856	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830712	chr6:82491029-82654531	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82507600-82509800	Enhancers	Hela-S3	cervix
2	chr6:82507600-82513200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr6:82508000-82511600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr6:82509600-82516600	Weak transcription	Stomach Mucosa	stomach

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