Variant report

Variant	rs1979224
Chromosome Location	chr8:126651397-126651398
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:126645737..126648602-chr8:126650844..126653008,2	K562	blood:
2	chr8:126442421..126446829-chr8:126648342..126652511,5	MCF-7	breast:
3	chr8:126441757..126444291-chr8:126648551..126653388,7	MCF-7	breast:

Variant related genes	Relation type
ENSG00000173334	Chromatin interaction

rs_ID	r²[population]
rs10095973	1.00[EUR][1000 genomes]
rs12548259	1.00[EUR][1000 genomes]
rs13364666	1.00[EUR][1000 genomes]
rs13364676	1.00[EUR][1000 genomes]
rs13364688	1.00[EUR][1000 genomes]
rs13364791	1.00[EUR][1000 genomes]
rs16900750	1.00[EUR][1000 genomes]
rs28589371	1.00[EUR][1000 genomes]
rs4372019	1.00[EUR][1000 genomes]
rs55734315	1.00[EUR][1000 genomes]
rs56699992	1.00[EUR][1000 genomes]
rs58950777	1.00[EUR][1000 genomes]
rs59505399	1.00[EUR][1000 genomes]
rs60394496	1.00[EUR][1000 genomes]
rs61501580	1.00[EUR][1000 genomes]
rs61571801	1.00[EUR][1000 genomes]
rs61589624	1.00[EUR][1000 genomes]
rs6990459	1.00[EUR][1000 genomes]
rs73336675	1.00[EUR][1000 genomes]
rs73338611	1.00[EUR][1000 genomes]
rs73338686	1.00[EUR][1000 genomes]
rs73338687	1.00[EUR][1000 genomes]
rs73346808	1.00[EUR][1000 genomes]
rs73346811	1.00[EUR][1000 genomes]
rs73346821	1.00[EUR][1000 genomes]
rs73346881	1.00[EUR][1000 genomes]
rs73346898	1.00[EUR][1000 genomes]
rs73349008	1.00[EUR][1000 genomes]
rs73349041	1.00[EUR][1000 genomes]
rs73349074	1.00[EUR][1000 genomes]
rs73706850	1.00[EUR][1000 genomes]
rs73706855	1.00[EUR][1000 genomes]
rs7834570	1.00[EUR][1000 genomes]
rs7835068	1.00[EUR][1000 genomes]
rs7835809	1.00[EUR][1000 genomes]
rs7845655	1.00[EUR][1000 genomes]
rs7845670	1.00[EUR][1000 genomes]

Chromatin state (count:77 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126639600-126653600	Weak transcription	Pancreas	Pancrea
2	chr8:126647600-126652200	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr8:126648600-126651400	Enhancers	HepG2	liver
4	chr8:126648600-126651800	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr8:126648800-126651400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr8:126648800-126651400	Enhancers	Placenta	Placenta
7	chr8:126648800-126651400	Enhancers	Spleen	Spleen
8	chr8:126649000-126651600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr8:126649000-126653600	Weak transcription	Colonic Mucosa	Colon
10	chr8:126649200-126652200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr8:126649200-126654400	Enhancers	HUVEC	blood vessel
12	chr8:126649400-126651400	Enhancers	H1 Cell Line	embryonic stem cell
13	chr8:126649600-126651400	Enhancers	Fetal Muscle Trunk	muscle
14	chr8:126649600-126653400	Weak transcription	Psoas Muscle	Psoas
15	chr8:126649600-126653600	Weak transcription	Rectal Mucosa Donor 31	rectum
16	chr8:126649600-126653800	Weak transcription	Fetal Intestine Small	intestine
17	chr8:126649800-126651400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr8:126649800-126652200	Enhancers	GM12878-XiMat	blood
19	chr8:126649800-126653400	Weak transcription	Brain Anterior Caudate	brain
20	chr8:126649800-126653400	Weak transcription	Fetal Thymus	thymus
21	chr8:126649800-126653600	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr8:126649800-126653600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
23	chr8:126649800-126653600	Weak transcription	Duodenum Mucosa	Duodenum
24	chr8:126649800-126653600	Weak transcription	Esophagus	oesophagus
25	chr8:126649800-126653600	Weak transcription	Fetal Intestine Large	intestine
26	chr8:126649800-126653600	Weak transcription	Rectal Mucosa Donor 29	rectum
27	chr8:126649800-126655200	Weak transcription	HUES48 Cell Line	embryonic stem cell
28	chr8:126649800-126656600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
29	chr8:126649800-126656600	Weak transcription	Stomach Mucosa	stomach
30	chr8:126649800-126660400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr8:126650000-126653400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
32	chr8:126650000-126653400	Weak transcription	Skeletal Muscle Female	skeletal muscle
33	chr8:126650000-126656200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
34	chr8:126650200-126651400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
35	chr8:126650200-126651400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
36	chr8:126650200-126651600	Enhancers	A549	lung
37	chr8:126650200-126653200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
38	chr8:126650200-126653200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr8:126650200-126653200	Weak transcription	Fetal Kidney	kidney
40	chr8:126650200-126653400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
41	chr8:126650200-126653800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr8:126650200-126653800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr8:126650200-126655400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr8:126650400-126653400	Weak transcription	Fetal Lung	lung
45	chr8:126650400-126654400	Weak transcription	NHEK	skin
46	chr8:126650400-126654800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
47	chr8:126650400-126656000	Weak transcription	Primary B cells from peripheral blood	blood
48	chr8:126650400-126656200	Weak transcription	Primary T helper cells PMA-I stimulated	--
49	chr8:126650400-126656400	Weak transcription	Fetal Heart	heart
50	chr8:126650600-126651600	Weak transcription	HMEC	breast

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