The 2.0 version of rSNPBase

Variant report

Variant rs2006126
Chromosome Location chr13:48888885-48888886
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48878800-48890800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr13:48879000-48891000 Weak transcription Esophagus oesophagus
3 chr13:48879400-48890000 Weak transcription Fetal Brain Male brain
4 chr13:48879400-48890000 Weak transcription Fetal Intestine Large intestine
5 chr13:48879400-48894200 Weak transcription A549 lung
6 chr13:48879600-48889400 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr13:48879800-48892400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr13:48880000-48889400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr13:48880000-48892000 Weak transcription HSMMtube muscle
10 chr13:48880200-48889200 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr13:48880200-48890600 Weak transcription NHLF lung
12 chr13:48880200-48891400 Weak transcription Muscle Satellite Cultured Cells --
13 chr13:48880200-48892200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr13:48880200-48892200 Weak transcription Fetal Kidney kidney
15 chr13:48880200-48892200 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr13:48880200-48892600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr13:48880200-48892600 Weak transcription NH-A brain
18 chr13:48880200-48893800 Weak transcription Brain Inferior Temporal Lobe brain
19 chr13:48880200-48894400 Weak transcription Brain Anterior Caudate brain
20 chr13:48880200-48913200 Weak transcription Aorta Aorta
21 chr13:48880400-48889600 Weak transcription Fetal Brain Female brain
22 chr13:48880400-48890200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr13:48880400-48890400 Weak transcription Gastric stomach
24 chr13:48880400-48890400 Weak transcription Lung lung
25 chr13:48880400-48890800 Weak transcription Duodenum Mucosa Duodenum
26 chr13:48880400-48891000 Weak transcription Fetal Muscle Trunk muscle
27 chr13:48880400-48891200 Weak transcription Placenta Placenta
28 chr13:48880400-48892400 Weak transcription HMEC breast
29 chr13:48880400-48892600 Weak transcription Primary hematopoietic stem cells blood
30 chr13:48880600-48890200 Weak transcription Primary T cells fromperipheralblood blood
31 chr13:48880600-48890200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr13:48880600-48890400 Weak transcription Left Ventricle heart
33 chr13:48880600-48890400 Weak transcription Right Ventricle heart
34 chr13:48880600-48891000 Weak transcription Pancreas Pancrea
35 chr13:48880600-48891000 Weak transcription Stomach Smooth Muscle stomach
36 chr13:48880600-48891800 Weak transcription HUVEC blood vessel
37 chr13:48880600-48892200 Weak transcription Brain Hippocampus Middle brain
38 chr13:48880600-48892200 Weak transcription Rectal Smooth Muscle rectum
39 chr13:48880600-48892400 Weak transcription Ovary ovary
40 chr13:48880600-48894600 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr13:48880600-48924600 Weak transcription Psoas Muscle Psoas
42 chr13:48880800-48889800 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr13:48880800-48890000 Weak transcription Thymus Thymus
44 chr13:48880800-48890200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr13:48880800-48890200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr13:48880800-48891000 Weak transcription NHEK skin
47 chr13:48880800-48892200 Weak transcription Colon Smooth Muscle Colon
48 chr13:48880800-48892400 Weak transcription Primary T cells from cord blood blood
49 chr13:48880800-48893200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr13:48880800-48895200 Weak transcription Small Intestine intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015