The 2.0 version of rSNPBase

Variant report

Variant rs2007508
Chromosome Location chr1:85616443-85616444
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85603800-85618800 Weak transcription Gastric stomach
2 chr1:85603800-85632200 Weak transcription Fetal Lung lung
3 chr1:85608600-85655200 Weak transcription Aorta Aorta
4 chr1:85608800-85629200 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr1:85610400-85647800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:85610600-85630600 Weak transcription Fetal Intestine Small intestine
7 chr1:85611400-85617000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr1:85611400-85629600 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr1:85614000-85617600 Enhancers Fetal Heart heart
10 chr1:85614400-85618800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr1:85614800-85619000 Weak transcription Right Atrium heart
12 chr1:85615000-85621800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr1:85615400-85647600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:85615400-85655200 Weak transcription Lung lung
15 chr1:85615600-85654000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:85615800-85617000 Weak transcription Psoas Muscle Psoas
17 chr1:85615800-85617200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:85615800-85625200 Weak transcription Rectal Smooth Muscle rectum
19 chr1:85615800-85627200 Weak transcription Ovary ovary
20 chr1:85615800-85627600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr1:85615800-85629400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr1:85615800-85630600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:85615800-85632800 Weak transcription H9 Cell Line embryonic stem cell
24 chr1:85615800-85665800 Weak transcription Esophagus oesophagus
25 chr1:85616000-85617000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:85616000-85617000 Weak transcription Right Ventricle heart
27 chr1:85616000-85618400 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr1:85616000-85618600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:85616000-85618800 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr1:85616000-85618800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:85616000-85618800 Weak transcription GM12878-XiMat blood
32 chr1:85616000-85632200 Weak transcription Stomach Smooth Muscle stomach
33 chr1:85616000-85634600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:85616000-85638800 Weak transcription Colon Smooth Muscle Colon
35 chr1:85616400-85616800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:85616400-85627600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:85616400-85635800 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015