The 2.0 version of rSNPBase

Variant report

Variant rs817419
Chromosome Location chr1:85630015-85630016
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85603800-85632200 Weak transcription Fetal Lung lung
2 chr1:85608600-85655200 Weak transcription Aorta Aorta
3 chr1:85610400-85647800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr1:85610600-85630600 Weak transcription Fetal Intestine Small intestine
5 chr1:85615400-85647600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr1:85615400-85655200 Weak transcription Lung lung
7 chr1:85615600-85654000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:85615800-85630600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:85615800-85632800 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:85615800-85665800 Weak transcription Esophagus oesophagus
11 chr1:85616000-85632200 Weak transcription Stomach Smooth Muscle stomach
12 chr1:85616000-85634600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:85616000-85638800 Weak transcription Colon Smooth Muscle Colon
14 chr1:85616400-85635800 Weak transcription Left Ventricle heart
15 chr1:85617800-85648000 Weak transcription Liver Liver
16 chr1:85619000-85655000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr1:85619200-85647400 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr1:85619800-85630600 Weak transcription Fetal Stomach stomach
19 chr1:85619800-85632600 Weak transcription Fetal Intestine Large intestine
20 chr1:85619800-85646800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:85621000-85645000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:85624400-85647600 Weak transcription HSMM muscle
23 chr1:85625600-85654600 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:85626200-85632800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:85626600-85637200 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr1:85626600-85637400 Weak transcription K562 blood
27 chr1:85626600-85638400 Weak transcription Pancreas Pancrea
28 chr1:85626800-85655600 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr1:85627200-85657400 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr1:85627400-85654200 Weak transcription Gastric stomach
31 chr1:85627400-85655800 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr1:85627400-85663000 Weak transcription NHEK skin
33 chr1:85627600-85630600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:85627600-85648000 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr1:85627800-85655800 Weak transcription NHDF-Ad bronchial
36 chr1:85627800-85664400 Weak transcription Osteobl bone
37 chr1:85628200-85632600 Weak transcription Ovary ovary
38 chr1:85628400-85647400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:85628600-85632200 Weak transcription Fetal Heart heart
40 chr1:85628600-85648000 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr1:85629000-85630600 Strong transcription HUES64 Cell Line embryonic stem cell
42 chr1:85629000-85645200 Weak transcription Duodenum Mucosa Duodenum
43 chr1:85629200-85630800 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr1:85629400-85631200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr1:85629400-85631200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:85629600-85630400 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr1:85629800-85653600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015