The 2.0 version of rSNPBase

Variant report

Variant rs817395
Chromosome Location chr1:85613172-85613173
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85594800-85614400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
2 chr1:85603800-85614200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:85603800-85615600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:85603800-85618800 Weak transcription Gastric stomach
5 chr1:85603800-85632200 Weak transcription Fetal Lung lung
6 chr1:85608600-85614200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:85608600-85655200 Weak transcription Aorta Aorta
8 chr1:85608800-85629200 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr1:85609200-85614200 Weak transcription Left Ventricle heart
10 chr1:85610400-85613800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr1:85610400-85614200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:85610400-85615600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:85610400-85647800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:85610600-85613800 Weak transcription H1 Cell Line embryonic stem cell
15 chr1:85610600-85613800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:85610600-85630600 Weak transcription Fetal Intestine Small intestine
17 chr1:85611200-85613800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:85611200-85615200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr1:85611400-85613600 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr1:85611400-85613600 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr1:85611400-85613800 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr1:85611400-85614200 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr1:85611400-85614400 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr1:85611400-85617000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr1:85611400-85629600 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr1:85612000-85614200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:85612600-85613200 Enhancers Muscle Satellite Cultured Cells --
28 chr1:85612600-85613400 Enhancers NHEK skin
29 chr1:85612800-85616000 Enhancers GM12878-XiMat blood
30 chr1:85613000-85614200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015