Variant report

Variant	rs2032857
Chromosome Location	chr5:146897098-146897099
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1368366	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1368367	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1432843	0.99[EUR][1000 genomes]
rs1432844	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs60291144	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs62379598	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6580464	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6580466	0.83[EUR][1000 genomes]
rs6580468	0.86[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6880491	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7706630	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:146890200-146901200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr5:146890200-146901200	Weak transcription	NHLF	lung
3	chr5:146890200-146901600	Weak transcription	NHDF-Ad	bronchial
4	chr5:146892200-146898800	Weak transcription	Brain Germinal Matrix	brain
5	chr5:146896400-146899000	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr5:146896600-146898600	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr5:146896600-146901200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr5:146896600-146901400	Weak transcription	HUVEC	blood vessel
9	chr5:146896800-146898800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr5:146897000-146898600	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr5:146897000-146898600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr5:146897000-146902000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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