Variant report

Variant	rs60291144
Chromosome Location	chr5:146875465-146875466
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1368366	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1368367	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1432843	0.90[EUR][1000 genomes]
rs1432844	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2032857	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs62379598	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6580464	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6580468	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6880491	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7706630	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:146851800-146883000	Weak transcription	Psoas Muscle	Psoas
2	chr5:146864600-146883000	Weak transcription	Stomach Smooth Muscle	stomach
3	chr5:146865200-146882600	Weak transcription	Fetal Stomach	stomach
4	chr5:146866800-146882600	Weak transcription	NHLF	lung
5	chr5:146866800-146883000	Weak transcription	Ovary	ovary
6	chr5:146870800-146880400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr5:146870800-146883000	Weak transcription	Colon Smooth Muscle	Colon
8	chr5:146871400-146886400	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr5:146871600-146887200	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr5:146872200-146882400	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr5:146873000-146882600	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr5:146873200-146887400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr5:146873400-146877000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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